Query EST sequence XX (FILE: 13150602+]) 1 GCAGAGGCCC GCGCCGTGCT AGCTTGCTAG TTGCAAGCAC CAGCCGACCA CCAAACGATA 61 GCGCACGCGG ACAATTTAAC AGCATCAGGT TTAGGCCCTG CTGCCGTCGT CGAGCGCCCG 121 GGCCACCGCA CACCTGAAAG CAATGGAGAT CGTCGCCACG CGCTCCCCGG CCTGCTGCGC 181 CGCCGTGTCC TTCTCCCAGT CGTACAGGCC CAAGGCGTCC AGGCCGCCGA CCACGTTCTA 241 CGGCGAGTCG GTGCGGGTGA ATACGGCGCG GCCGCTCTCG GCGAGGAGGC AGTCCAAGGC 301 GGCCAGCCGC GCGGCCCTCA GTGCCCGGTG CGAGATCGGA GACAGCCTGG AGGAGTTCCT 361 GACCAAGGCG ACGCCGGACA AGAACCTCAT CAGGCTGCTC ATCTGCATGG GGGAGGCCAT 421 GAGGACGATC GCGTTCAAGG TCCGGACGGC GTCCTGCGGC GGCACGGCCT GTGTCAATTC 481 CTTCGGCGAC GAGCAGCTGG CCGTCGACAT GCTCGCTAAC AAGCTCCTCT TTGAGGCTTT 541 GGAGTACTCA CATGTGTGTA AGTATGCGTG CTCCGAGGAA GTCCCCGAGC TCCAGGACAT 601 GGGTYGGCCA GTCGAAGGTG GTTTCAGCGT TGCGTTCGAC YCCCTCGACG GCTCCARCAT 661 TGTCGACACA AMTTCACCGT GGGAACATCT TCGG Predicted gene structure (within BAC gi| 51315585 | segment 112566 to 113489): Exon 1 112566 112772 ( 207 n); EST 8 214 ( 207 n); score: 0.990 Intron 1 112773 112901 ( 129 n); Pd: 0.989 (s: 0.98), Pa: 0.037 (s: 0.98) Exon 2 112902 113036 ( 135 n); EST 215 349 ( 135 n); score: 0.985 Intron 2 113037 113128 ( 92 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 1.00) Exon 3 113129 113314 ( 186 n); EST 350 535 ( 186 n); score: 1.000 Intron 3 113315 113407 ( 93 n); Pd: 0.308 (s: 1.00), Pa: 0.939 (s: 1.00) Exon 4 113408 113489 ( 82 n); EST 536 617 ( 82 n); score: 0.976 MATCH chr+ 13150602+ 0.990 610 0.879 C PGS_chr+_13150602+ (112566 112772,112902 113036,113129 113314,113408 113489) Alignment: CCCGCGCCGT GCTAGCTTGC TAGTTGCAAG CACCAGCCGA CCACCAAACG GTAGCGCACG 112625 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||| CCCGCGCCGT GCTAGCTTGC TAGTTGCAAG CACCAGCCGA CCACCAAACG ATAGCGCACG 67 CGGACAATTT AACAGCATCA GGTTTAGGCC CTGCTGCCGT CGTCGAGCGC CCGGGCCACC 112685 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGACAATTT AACAGCATCA GGTTTAGGCC CTGCTGCCGT CGTCGAGCGC CCGGGCCACC 127 GCACACCTGA AAGCAATGGA GATCGTCGCC ACGCGCTCCC CGGCTTGCTG CGCCGCCGTG 112745 |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| |||||||||| GCACACCTGA AAGCAATGGA GATCGTCGCC ACGCGCTCCC CGGCCTGCTG CGCCGCCGTG 187 TCCTTCTCCC AGTCGTACAG GCCCAAGGTA CGTACGGCAC CTTCATATCT CGTGACTACT 112805 |||||||||| |||||||||| ||||||| TCCTTCTCCC AGTCGTACAG GCCCAAG... .......... .......... .......... 214 GTACGTAAGC GGAAAGTAGC AGCAGCTCGT CGCGCACACG TGCAGAAGCC TTAAGTTTGC 112865 .......... .......... .......... .......... .......... .......... 214 TGATGATGTT GATGACTGGC GCCACACGTG CGGCAGGCGT CCAGGCCGCC GACCACGTTC 112925 |||| |||||||||| |||||||||| .......... .......... .......... ......GCGT CCAGGCCGCC GACCACGTTC 238 TACGGCGAGT CGGTGCGGGT GAACACAGCG CGGCCGCTCT CGGCGAGGAG GCAGTCCAAG 112985 |||||||||| |||||||||| ||| || ||| |||||||||| |||||||||| |||||||||| TACGGCGAGT CGGTGCGGGT GAATACGGCG CGGCCGCTCT CGGCGAGGAG GCAGTCCAAG 298 GCGGCCAGCC GCGCGGCCCT CAGTGCCCGG TGCGAGATCG GAGACAGCCT GGTGCGTACG 113045 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | GCGGCCAGCC GCGCGGCCCT CAGTGCCCGG TGCGAGATCG GAGACAGCCT G......... 349 CGTACATAAC ATCGGCCGTC GTCGAAGAAC GAAGCTGACG CCGCTGCCGC GTGCCGGCTC 113105 .......... .......... .......... .......... .......... .......... 349 CGGGTTGTGG TGTGGTGTGG CAGGAGGAGT TCCTGACCAA GGCGACGCCG GACAAGAACC 113165 ||||||| |||||||||| |||||||||| |||||||||| .......... .......... ...GAGGAGT TCCTGACCAA GGCGACGCCG GACAAGAACC 386 TCATCAGGCT GCTCATCTGC ATGGGGGAGG CCATGAGGAC GATCGCGTTC AAGGTCCGGA 113225 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCATCAGGCT GCTCATCTGC ATGGGGGAGG CCATGAGGAC GATCGCGTTC AAGGTCCGGA 446 CGGCGTCCTG CGGCGGCACG GCCTGTGTCA ATTCCTTCGG CGACGAGCAG CTGGCCGTCG 113285 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGGCGTCCTG CGGCGGCACG GCCTGTGTCA ATTCCTTCGG CGACGAGCAG CTGGCCGTCG 506 ACATGCTCGC TAACAAGCTC CTCTTTGAGG TGTGGTCTCG CACCGTACCG TACGTCTCTC 113345 |||||||||| |||||||||| ||||||||| ACATGCTCGC TAACAAGCTC CTCTTTGAG. .......... .......... .......... 535 TCTCACACAC ACACAACACA ACGGTCCTTT TCAATTGGCT CGTGCCTGCT CTGTGCCTGC 113405 .......... .......... .......... .......... .......... .......... 535 AGGCTTTGGA GTACTCACAT GTGTGTAAGT ATGCGTGCTC CGAGGAAGTC CCCGAGCTCC 113465 |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ..GCTTTGGA GTACTCACAT GTGTGTAAGT ATGCGTGCTC CGAGGAAGTC CCCGAGCTCC 593 AGGACATGGG TGGCCCAGTC GAAG 113489 |||||||||| | | |||||| |||| AGGACATGGG TYGGCCAGTC GAAG 617 hqPGS_chr+_13150602+ (112566 112772,112902 113036,113129 113314,113408 113489)