Query EST sequence XX (FILE: 78112655-]) 1 aaggtaaatg gcagcatgtg aaggacacca cgaccattgg ggaagggaag atgttctctc 61 ctggtaatct gagggcgaca ttcgataacc ctgagtacga caagctcatc aactactacg 121 tcaaggagaa gtacacattg cgctacactg gaggaatggt tcccgatgtc aaccagatca 181 tagtgaagga gaagggcatc ttcaccaacg tgacgtcccc gacggccaag gccaagctgc 241 ggctcctctt cgaggtggcg cccctgggct tcttgatgga gaaggccggc gggtacagca 301 gcgacggcaa gcagtcggtg ctggacaggg tgatcaacga gctcgacgag cggacccagg 361 tggcctatgg gtccaagaac gagatcatcc ggttcgagga gaccctctac ggctcgtcca 421 ggctcgccgc cagcgccacc gccaccgccc gcgcccttat ttgaattact agaatccggg 481 ctcgtagatg ctggagtaca cagtacaggg aaattgccca cttttttcat caacttaagt 541 ttttagatta aacttttttg aaacaatcag acaggagatc tgtcttatat attgatgagg 601 agaaagatgc ccaaaggcaa aaaaaaaaaa agtcgat Predicted gene structure (within BAC gi| 51315585 | segment 102705 to 104109): Exon 1 104109 104006 ( 104 n); EST 1 104 ( 104 n); score: 1.000 Intron 1 104005 103895 ( 111 n); Pd: 1.000 (s: 1.00), Pa: 0.817 (s: 1.00) Exon 2 103894 103823 ( 72 n); EST 105 176 ( 72 n); score: 1.000 Intron 2 103822 103165 ( 658 n); Pd: 0.998 (s: 1.00), Pa: 0.697 (s: 1.00) Exon 3 103164 102705 ( 460 n); EST 177 637 ( 461 n); score: 0.992 MATCH chr- 78112655- 0.994 636 0.998 C PGS_chr-_78112655- (104109 104006,103894 103823,103164 102705) Alignment: AAGGTAAATG GCAGCATGTG AAGGACACCA CGACCATTGG GGAAGGGAAG ATGTTCTCTC 104050 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGTAAATG GCAGCATGTG AAGGACACCA CGACCATTGG GGAAGGGAAG ATGTTCTCTC 60 CTGGTAATCT GAGGGCGACA TTCGATAACC CTGAGTACGA CAAGGTACTC CGTTACTGGC 103990 |||||||||| |||||||||| |||||||||| |||||||||| |||| CTGGTAATCT GAGGGCGACA TTCGATAACC CTGAGTACGA CAAG...... .......... 104 TCCTGTTACT GTCAGTATTT TTTTTTCTTC TTCTTAATAT CTGCTACGGC TTTCTGTGCG 103930 .......... .......... .......... .......... .......... .......... 104 CGCCTAATCG GTGCTACAAA TATATGTATC TTCAGCTCAT CAACTACTAC GTCAAGGAGA 103870 ||||| |||||||||| |||||||||| .......... .......... .......... .....CTCAT CAACTACTAC GTCAAGGAGA 129 AGTACACATT GCGCTACACT GGAGGAATGG TTCCCGATGT CAACCAGGTA CATACGTATA 103810 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| AGTACACATT GCGCTACACT GGAGGAATGG TTCCCGATGT CAACCAG... .......... 176 TATCACAAAA ACTTTAAATA ATTCACACCC TTAGGGCTTG TTCGGTTAGC TCTCAATCCA 103750 .......... .......... .......... .......... .......... .......... 176 TATGGATTGA GTGGGATTGG GTGGGATTAA ATCCCAAGCA AGTCAAAGTT CTTCTAAATT 103690 .......... .......... .......... .......... .......... .......... 176 TTTTCCAATC CCATTCAATC CATGTATAAT AGGAATAACC GAACAAACCC TTAGTAAACC 103630 .......... .......... .......... .......... .......... .......... 176 ACACAGAAAA ATCCCGACAC CTCACAACCC GTACGTTCAC TCGATCGGAT CACTAGCTTA 103570 .......... .......... .......... .......... .......... .......... 176 ATTAGTAATC AGGAGTAGTA CATGTTCCAA AACCAAACAG ATCCATATAT GATTAACCTG 103510 .......... .......... .......... .......... .......... .......... 176 TCATGTCAAC TCTCTACACA CCTTGCACAC CAAAACAGCC AAATTTTCAG AGAGGACGAC 103450 .......... .......... .......... .......... .......... .......... 176 GGCGCAAACT TTTGAGAAGA AAGAATTTGG TTTGACGTTG CCAGTAAAAT GTCTCGGGCT 103390 .......... .......... .......... .......... .......... .......... 176 GTAGAGTCAC TGCAAGCCCA TGCTAGTGAA CATTGAGCTC TGTGTACCAG CGTCTGCTTT 103330 .......... .......... .......... .......... .......... .......... 176 AAAGCAAGGC CACGCCAAGC AACACAGCAA TTCCCTACAG TGACCCCCCA ACCTCGCTTT 103270 .......... .......... .......... .......... .......... .......... 176 CGCTTTAGGT CTTTTCCTAT GCCGCTTTCA GTACACAGAA CCTGCGTGAG CACCAGCATA 103210 .......... .......... .......... .......... .......... .......... 176 TATGCATGCA TATGATGCCT GTGAGTATGG TCGATGATGA CGCAGATCAT AGTGAAGGAG 103150 ||||| |||||||||| .......... .......... .......... .......... .....ATCAT AGTGAAGGAG 191 AAGGGCATCT TCACCAACGT GACGTCCCCG ACGGCCAAGG CCAAGCTGCG GCTCCTCTTC 103090 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGGGCATCT TCACCAACGT GACGTCCCCG ACGGCCAAGG CCAAGCTGCG GCTCCTCTTC 251 GAGGTGGCGC CCCTGGGCTT CTTGATGGAG AAGGCCGGCG GGTACAGCAG CGACGGCAAG 103030 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAGGTGGCGC CCCTGGGCTT CTTGATGGAG AAGGCCGGCG GGTACAGCAG CGACGGCAAG 311 CAGTCGGTGC TGGACAGGGT GATCAACGAG CTCGACGAGC GGACCCAGGT GGCCTATGGG 102970 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAGTCGGTGC TGGACAGGGT GATCAACGAG CTCGACGAGC GGACCCAGGT GGCCTATGGG 371 TCCAAGAACG AGATCATCCG GTTCGAGGAG ACCCTCTACG GCTCGTCCAG GCTCGCCGCC 102910 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCCAAGAACG AGATCATCCG GTTCGAGGAG ACCCTCTACG GCTCGTCCAG GCTCGCCGCC 431 AGCGCCACCG CCACCGCCCG CGCCCTTATC TGAATTACTA GAATCCGGGC TCGTAGATGC 102850 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AGCGCCACCG CCACCGCCCG CGCCCTTATT TGAATTACTA GAATCCGGGC TCGTAGATGC 491 TGGAGTACAC AGTACAGGGA AATTGCCCAC TTTTTTCATC AACTTAAGTT TTTAGATTAA 102790 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGGAGTACAC AGTACAGGGA AATTGCCCAC TTTTTTCATC AACTTAAGTT TTTAGATTAA 551 ACTTTTTTGA AACAATCAGA CAGGAGATCT GTCTTATATA TTGATGAGGA GAAAGATGCC 102730 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTTTTTTGA AACAATCAGA CAGGAGATCT GTCTTATATA TTGATGAGGA GAAAGATGCC 611 CAAAGGC-AA AAAAAAAAAA GTCGAT 102705 ||||||| || |||||||||| |||||| CAAAGGCAAA AAAAAAAAAA GTCGAT 637 hqPGS_chr-_78112655- (104109 104006,103894 103823,103164 102705)