Query EST sequence XX (FILE: 71441960+]) 1 CCAGAGTGTC GCTTCTGCAT CCATGGGCCC ACCGCCTCCA TGGCCGCTTC ATGCCTTCTC 61 CTCATCTGTT CCGGTCTCCA GCCTGCCCCC CTCGTGCTCC AACGCCTCCA GGGCTTTCGG 121 CCGCCGCAGG AGGCGAGGCT CAGGCGGCTG CGGTGGCGGA GTTCGTGACG TCGGAGAGGG 181 TCAAGGTGGC GGCGATGCTG GGGCTAGCCC TCGCGCTCTG CAACGCCGAC CGCGTCGTCA 241 TGTCCGTCGC CATCGTCCCT CTCTCGCAGG CGTACGGGTG GACCCCGTCA TTCGCCGGCG 301 TCGTGCAGTC ATCCTTTCTT TGGGGATATC TGATGTCGCC GATAATTGGT GGAGCACTTG 361 TTGATTACTA CGGTGGAAAA CGAGTCATGG CTTACGGTGT AGCATTATGG TCCTTGGCTA 421 CGTTCCTGTC TCCATGGGCA GCTGGTCGAT CTATCTGGTT GTTTCTCTTT ACCAGAGTCC 481 TGCTGGGTAT TGCAGAAGGA GTGGCACTCC CAAGCATGAA CAACATGGTG TTGAGGTGGT 541 TTCCTCGCAC AGAGAGATCT AGTGCTGTGG GTATTGCAAT GGCTGGCTTT CAGCTTGGCA 601 ATACCATTGG GTTACTTCTT TCCCCAATTA TCATGTCACG AACTGGAATA TTTGGACCTT 661 TTGTGATATT TGGATTATTT GGATTTCTCT GGGTGTTGGT GTGGATACCG GCTATATCTG 721 GCACGCCAGG TGAACATGCA CAGATATCAG CATATGAACT GAAGTATATA ACCAAAGGCC 781 AGAAAATTGG TGAAACCACA AATTNGAAAG TGAAAAA Predicted gene structure (within BAC gi| 51315585 | segment 158794 to 160260): Exon 1 158794 159101 ( 308 n); EST 1 308 ( 308 n); score: 1.000 Intron 1 159102 159618 ( 517 n); Pd: 0.206 (s: 1.00), Pa: 0.878 (s: 1.00) Exon 2 159619 159845 ( 227 n); EST 309 535 ( 227 n); score: 1.000 Intron 2 159846 159980 ( 135 n); Pd: 0.992 (s: 1.00), Pa: 0.994 (s: 1.00) Exon 3 159981 160260 ( 280 n); EST 536 817 ( 282 n); score: 0.979 MATCH chr+ 71441960+ 0.993 815 0.998 C PGS_chr+_71441960+ (158794 159101,159619 159845,159981 160260) Alignment: CCAGAGTGTC GCTTCTGCAT CCATGGGCCC ACCGCCTCCA TGGCCGCTTC ATGCCTTCTC 158853 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCAGAGTGTC GCTTCTGCAT CCATGGGCCC ACCGCCTCCA TGGCCGCTTC ATGCCTTCTC 60 CTCATCTGTT CCGGTCTCCA GCCTGCCCCC CTCGTGCTCC AACGCCTCCA GGGCTTTCGG 158913 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCATCTGTT CCGGTCTCCA GCCTGCCCCC CTCGTGCTCC AACGCCTCCA GGGCTTTCGG 120 CCGCCGCAGG AGGCGAGGCT CAGGCGGCTG CGGTGGCGGA GTTCGTGACG TCGGAGAGGG 158973 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGCCGCAGG AGGCGAGGCT CAGGCGGCTG CGGTGGCGGA GTTCGTGACG TCGGAGAGGG 180 TCAAGGTGGC GGCGATGCTG GGGCTAGCCC TCGCGCTCTG CAACGCCGAC CGCGTCGTCA 159033 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCAAGGTGGC GGCGATGCTG GGGCTAGCCC TCGCGCTCTG CAACGCCGAC CGCGTCGTCA 240 TGTCCGTCGC CATCGTCCCT CTCTCGCAGG CGTACGGGTG GACCCCGTCA TTCGCCGGCG 159093 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGTCCGTCGC CATCGTCCCT CTCTCGCAGG CGTACGGGTG GACCCCGTCA TTCGCCGGCG 300 TCGTGCAGGT TCCCAGTTTT CTCTGACTCT GTGCGATTTT GTTTGGTTTC GCCTGAGCTA 159153 |||||||| TCGTGCAG.. .......... .......... .......... .......... .......... 308 GTGGCTACTG AGTAGTACTG ACTAGCCCAT TCTCATTCAA ACGTCTGGTT TTCAGAGTGC 159213 .......... .......... .......... .......... .......... .......... 308 TCAATTGCAG TAATTAGCGT TTTAATGATG TGGTGTTATA ATAATTTATT TAAATGATTA 159273 .......... .......... .......... .......... .......... .......... 308 CTTTTAAGTG AAACTGTCCT TACATGTCTT GAATTTCACA TGCGTGGGGT CTGGGGAAAA 159333 .......... .......... .......... .......... .......... .......... 308 TGTGGAGCTT CAAACCCGTG ACCTGACTAG TTGAGATAGC TCTCACTCTC ACCACTGCAT 159393 .......... .......... .......... .......... .......... .......... 308 CAGACGCATC AAACTTGCCC TTCTAGCAAA ATACTAAATA TAGTTAATGA GGTTTGAATT 159453 .......... .......... .......... .......... .......... .......... 308 TTCACTACAA AGCTGTGTAG CACTCATATT TCCTGCTTAT TTCTCACTCA GGCTGCTGTT 159513 .......... .......... .......... .......... .......... .......... 308 TTGAAGTAAA TGATGAAAAA TTACACATAA GAAAGTAAGG GCATGAGCTT GCCCATCTTA 159573 .......... .......... .......... .......... .......... .......... 308 TTTGATGAAT ATTCTGATGC CATTGTGTTT TGTCACTGCA AACAGTCATC CTTTCTTTGG 159633 ||||| |||||||||| .......... .......... .......... .......... .....TCATC CTTTCTTTGG 323 GGATATCTGA TGTCGCCGAT AATTGGTGGA GCACTTGTTG ATTACTACGG TGGAAAACGA 159693 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGATATCTGA TGTCGCCGAT AATTGGTGGA GCACTTGTTG ATTACTACGG TGGAAAACGA 383 GTCATGGCTT ACGGTGTAGC ATTATGGTCC TTGGCTACGT TCCTGTCTCC ATGGGCAGCT 159753 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCATGGCTT ACGGTGTAGC ATTATGGTCC TTGGCTACGT TCCTGTCTCC ATGGGCAGCT 443 GGTCGATCTA TCTGGTTGTT TCTCTTTACC AGAGTCCTGC TGGGTATTGC AGAAGGAGTG 159813 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGTCGATCTA TCTGGTTGTT TCTCTTTACC AGAGTCCTGC TGGGTATTGC AGAAGGAGTG 503 GCACTCCCAA GCATGAACAA CATGGTGTTG AGGTATCTAC CTTTGTAACA TCATTCCTTT 159873 |||||||||| |||||||||| |||||||||| || GCACTCCCAA GCATGAACAA CATGGTGTTG AG........ .......... .......... 535 TGACTACTCC ATCTCCAACT TTTTCCCCAC AAAAACATAT TGTTGTTTGG CTGTGGGAAT 159933 .......... .......... .......... .......... .......... .......... 535 TTCTGCTAAG ATTTATGTAA GTGTTTGCAT TGGCCCCTTT ATTACAGGTG GTTTCCTCGC 159993 ||| |||||||||| .......... .......... .......... .......... .......GTG GTTTCCTCGC 548 ACAGAGAGAT CTAGTGCTGT GGGTATTGCA ATGGCTGGCT TTCAGCTTGG CAATACCATT 160053 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACAGAGAGAT CTAGTGCTGT GGGTATTGCA ATGGCTGGCT TTCAGCTTGG CAATACCATT 608 GGGTTACTTC TTTCCCCAAT TATCATGTCA CGAACTGGAA TATTTGGACC TTTTGTGATA 160113 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTACTTC TTTCCCCAAT TATCATGTCA CGAACTGGAA TATTTGGACC TTTTGTGATA 668 TTTGGATTAT TTGGATTTCT CTGGGTGTTG GTGTGGATAC CGGCTATATC TGGCACGCCA 160173 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGATTAT TTGGATTTCT CTGGGTGTTG GTGTGGATAC CGGCTATATC TGGCACGCCA 728 GGTGAACATG CACAGATATC AGCATATGAA CTGAAGTATA TAACCAAAGG CCAG-AAATT 160232 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ||||| GGTGAACATG CACAGATATC AGCATATGAA CTGAAGTATA TAACCAAAGG CCAGAAAATT 788 GGTGAAACCA CAAATTGG-A AGTGAAAAA 160260 |||||||||| |||||| | | ||||||||| GGTGAAACCA CAAATTNGAA AGTGAAAAA 817 hqPGS_chr+_71441960+ (158794 159101,159619 159845,159981 160260)