Query EST sequence XX (FILE: 71435181-]) 1 gacattactt taacacggaa gataatgcag tcaattggct ttctggggcc aggtattgct 61 ttgctctgtc tgaatgcagc aaagagtcca atcattgctt cagcctggct tacagttgct 121 gttggattga aatccttcgg ccactcaggt ttcttagtaa atctacagga gattgcccca 181 caatatgctg gagtcctaca tggaatgtca aatacagctg ggacatttgc tgccattcta 241 ggaactattg gagcagggtt ttttgttgat aggatgggtt ctttccgtgg atttttgata 301 ttgacgtcgc tcttatactt cagcagtgct cttttttggg acatctttgc tactggagag 361 cgtgttgatt ttgatggcac tggctagcaa ctcagaggaa ctttgcggtt ttctgtcctt 421 aaaacacata atgttgattc aggacagtgt ttttaccgcc aaccatcaag aagttatttg 481 cacctgaaga taaacaactt cagttacgac tgtacagtat tgggttcaac tttttaaagc 541 acgcagtgag tttattttgg atgtcgagta tcagtgatag ataaacacac gctgtgagtt 601 tatcttggaa gttgaatatc agtgatggat aaacacatgg aactgtcttt atagatcgtt 661 ttagattttc ttggagggat agtccctgac gatgtaacat ggaataaaca acgggcagga 721 tgccaaccat taatggcgcc gaaagtagta cataactg Predicted gene structure (within BAC gi| 51315585 | segment 160692 to 161914): Exon 1 160692 160721 ( 30 n); EST 1 30 ( 30 n); score: 1.000 Intron 1 160722 161002 ( 281 n); Pd: 0.095 (s: 0.00), Pa: 0.997 (s: 1.00) Exon 2 161003 161140 ( 138 n); EST 31 168 ( 138 n); score: 1.000 Intron 2 161141 161233 ( 93 n); Pd: 0.616 (s: 1.00), Pa: 0.595 (s: 0.00) Exon 3 161234 161267 ( 34 n); EST 169 202 ( 34 n); score: 1.000 Intron 3 161268 161358 ( 91 n); Pd: 0.412 (s: 0.00), Pa: 0.955 (s: 1.00) Exon 4 161359 161914 ( 556 n); EST 203 758 ( 556 n); score: 0.995 MATCH chr+ 71435181- 0.996 758 1.000 C PGS_chr+_71435181- (160692 160721,161003 161140,161234 161267,161359 161914) Alignment: GACATTACTT TAACACGGAA GATAATGCAG GTGTGTTGCT TCAACAAAAA ATAGTATTAA 160751 |||||||||| |||||||||| |||||||||| GACATTACTT TAACACGGAA GATAATGCAG .......... .......... .......... 30 AAGTCAGTGA AGTTTTCATT TGTTTTATTC GTATGATCTT GTGCACCTCT CCGCGCTCTT 160811 .......... .......... .......... .......... .......... .......... 30 ACCAAAAGGT GACATGCTTC CTGATATCTT GTGATCTATA AAATATTAAT CATAAGGTAC 160871 .......... .......... .......... .......... .......... .......... 30 AAAAACCAAA CATGTTAAGT CTTAAATAAC AGTGGCAGTT TATTTTCATC AATATTGGTT 160931 .......... .......... .......... .......... .......... .......... 30 CCTTTTTTGG TTTTGTCATT TCAAATGTAC ACTTCCTGTT GCCTTAACTT CTCTTCCTGA 160991 .......... .......... .......... .......... .......... .......... 30 CTATTCTGCA GTCAATTGGC TTTCTGGGGC CAGGTATTGC TTTGCTCTGT CTGAATGCAG 161051 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .TCAATTGGC TTTCTGGGGC CAGGTATTGC TTTGCTCTGT CTGAATGCAG 79 CAAAGAGTCC AATCATTGCT TCAGCCTGGC TTACAGTTGC TGTTGGATTG AAATCCTTCG 161111 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CAAAGAGTCC AATCATTGCT TCAGCCTGGC TTACAGTTGC TGTTGGATTG AAATCCTTCG 139 GCCACTCAGG TTTCTTAGTA AATCTACAGG TACTTTAGTT CAGTGATGGA ACAGACACTC 161171 |||||||||| |||||||||| ||||||||| GCCACTCAGG TTTCTTAGTA AATCTACAG. .......... .......... .......... 168 GTTCTTCTCC ATTTGGATCT TCTTTTTCCC ATCTGATATA TATCATTTCT AAAATGTAAC 161231 .......... .......... .......... .......... .......... .......... 168 AGGAGATTGC CCCACAATAT GCTGGAGTCC TACATGGTAC TAACTAGTAA ATATGCTCCT 161291 |||||||| |||||||||| |||||||||| |||||| ..GAGATTGC CCCACAATAT GCTGGAGTCC TACATG.... .......... .......... 202 TGTGTTAGCT AATATATTTC CATTTTGTTG CATTAACTAA CTTTGATCTA CAATTGTGCT 161351 .......... .......... .......... .......... .......... .......... 202 GTGACAGGAA TGTCAAATAC AGCTGGGACA TTTGCTGCCA TTCTAGGAAC TATTGGAGCA 161411 ||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......GAA TGTCAAATAC AGCTGGGACA TTTGCTGCCA TTCTAGGAAC TATTGGAGCA 255 GGGTTTTTTG TTGATAGGAT GGGTTCTTTC CGTGGATTTT TGATATTGAC GTCGCTCTTA 161471 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGTTTTTTG TTGATAGGAT GGGTTCTTTC CGTGGATTTT TGATATTGAC GTCGCTCTTA 315 TACTTCAGCA GTGCTCTTTT CTGGGACATC TTTGCTACTG GAGAGCGTGT TGATTTTGAT 161531 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| TACTTCAGCA GTGCTCTTTT TTGGGACATC TTTGCTACTG GAGAGCGTGT TGATTTTGAT 375 GGCACTGGCT AGCAACTCAG AGGAACTCTG CGGTTTTCTG TCCTTAAAAC ACATAATGTT 161591 |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| GGCACTGGCT AGCAACTCAG AGGAACTTTG CGGTTTTCTG TCCTTAAAAC ACATAATGTT 435 GATTCAGGAC AGTGTTTTTA CCGCCAACCA TCAAGAAGTT ATTTGCACCT GAAGATAAAC 161651 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GATTCAGGAC AGTGTTTTTA CCGCCAACCA TCAAGAAGTT ATTTGCACCT GAAGATAAAC 495 AACTTCAGTT ACGACTGTAC AGTATTGGGT TCAACTTTTT AAAGCACGCA GTGAGTTTAT 161711 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACTTCAGTT ACGACTGTAC AGTATTGGGT TCAACTTTTT AAAGCACGCA GTGAGTTTAT 555 CTTGGATGTC GAGTATCAGT GATAGATAAA CACACGCTGT GAGTTTATCT TGGAAGTTGA 161771 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTTGGATGTC GAGTATCAGT GATAGATAAA CACACGCTGT GAGTTTATCT TGGAAGTTGA 615 ATATCAGTGA TGGATAAACA CATGGAACTG TCTTTATAGA TCGTTTTAGA TTTTCTTGGA 161831 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATATCAGTGA TGGATAAACA CATGGAACTG TCTTTATAGA TCGTTTTAGA TTTTCTTGGA 675 GGGATAGTCC CTGACGATGT AACATGGAAT AAACAACGGG CAGGATGCCA ACCATTAATG 161891 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGATAGTCC CTGACGATGT AACATGGAAT AAACAACGGG CAGGATGCCA ACCATTAATG 735 GCGCCGAAAG TAGTACATAA CTG 161914 |||||||||| |||||||||| ||| GCGCCGAAAG TAGTACATAA CTG 758 hqPGS_chr+_71435181- (160692 160721,161003 161140,161234 161267,161359 161914)