Query EST sequence	XX (FILE: 78119605-])

         1  gtcctacatg gaaatgtcaa aatacagctg ggacatttgg tgccattttt gggaactatt
        61  ggagcagggt tttttgttga taggaagggg ttctttccgg ggatttttga tattgacgtc
       121  gcttttatac ttcagcagtg ctcttttttg gggacatctt tgctactgga gagcgtgttg
       181  attttgatgg cactggctag caactcagag gaactctgcg gttttctgtc cttaaaacac
       241  ataatgttga ttcaggacag tgtttttacc cccaaccatc aagaagttat ttgcacctga
       301  agataaacaa cttcagttac gactgtacag tattgggttc aactttttaa agcacgcagt
       361  gagtttattt tggatgtgga gtatcagtga tagataaaca cacgctgtga gtttatcttg
       421  gaagttgaat atcagtgatg gataaacaca tggaactgtc tttatagatc gttttagatt
       481  ttcttggagg gatagtccct gacgatgtaa catggaataa acaacgggca ggatgccaac
       541  cattaatggc gccgaaagta gtacataact gaaactgatt tgcagggtag ttaggaaatt
       601  ggaatcccaa ccattaaggg agtatgggtt tg                              

Predicted gene structure (within BAC gi| 51315585 | segment 161258 to 161975):

 Exon  1      161258      161267 (  10 n);        EST           1          10 (  10 n); score:  1.000
  Intron  1      161268      161358 (  91 n); Pd:  0.412 (s:  0.00), Pa:  0.955 (s:  0.78)
 Exon  2      161359      161975 ( 617 n);        EST          11         632 ( 622 n); score:  0.964

MATCH   chr+ 78119605-        0.964   627  0.992  C
PGS_chr+_78119605-     (161258  161267,161359  161975)

Alignment:

GTCCTACATG GTACTAACTA GTAAATATGC TCCTTGTGTT AGCTAATATA TTTCCATTTT          161317
||||||||||                                                       
GTCCTACATG .......... .......... .......... .......... ..........              10

GTTGCATTAA CTAACTTTGA TCTACAATTG TGCTGTGACA GG-AATGTC- AAATACAGCT          161375
                                             | ||||||  ||||||||||
.......... .......... .......... .......... .GAAATGTCA AAATACAGCT              29

GGGACATTTG CTGCCA-TTC TAGGAACTAT TGGAGCAGGG TTTTTTGTTG ATAGG-ATGG          161433
||||||||||  ||||| ||  | |||||||| |||||||||| |||||||||| ||||| | ||
GGGACATTTG GTGCCATTTT TGGGAACTAT TGGAGCAGGG TTTTTTGTTG ATAGGAAGGG              89

GTTCTTTCCG TGGATTTTTG ATATTGACGT CGCTCTTATA CTTCAGCAGT GCTCTTTTCT          161493
||||||||||  ||||||||| |||||||||| |||| ||||| |||||||||| |||||||| |
GTTCTTTCCG GGGATTTTTG ATATTGACGT CGCTTTTATA CTTCAGCAGT GCTCTTTTTT             149

-GGGACATCT TTGCTACTGG AGAGCGTGTT GATTTTGATG GCACTGGCTA GCAACTCAGA          161552
 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GGGGACATCT TTGCTACTGG AGAGCGTGTT GATTTTGATG GCACTGGCTA GCAACTCAGA             209

GGAACTCTGC GGTTTTCTGT CCTTAAAACA CATAATGTTG ATTCAGGACA GTGTTTTTAC          161612
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GGAACTCTGC GGTTTTCTGT CCTTAAAACA CATAATGTTG ATTCAGGACA GTGTTTTTAC             269

CGCCAACCAT CAAGAAGTTA TTTGCACCTG AAGATAAACA ACTTCAGTTA CGACTGTACA          161672
| |||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CCCCAACCAT CAAGAAGTTA TTTGCACCTG AAGATAAACA ACTTCAGTTA CGACTGTACA             329

GTATTGGGTT CAACTTTTTA AAGCACGCAG TGAGTTTATC TTGGATGTCG AGTATCAGTG          161732
|||||||||| |||||||||| |||||||||| |||||||||  |||||||| | ||||||||||
GTATTGGGTT CAACTTTTTA AAGCACGCAG TGAGTTTATT TTGGATGTGG AGTATCAGTG             389

ATAGATAAAC ACACGCTGTG AGTTTATCTT GGAAGTTGAA TATCAGTGAT GGATAAACAC          161792
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ATAGATAAAC ACACGCTGTG AGTTTATCTT GGAAGTTGAA TATCAGTGAT GGATAAACAC             449

ATGGAACTGT CTTTATAGAT CGTTTTAGAT TTTCTTGGAG GGATAGTCCC TGACGATGTA          161852
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ATGGAACTGT CTTTATAGAT CGTTTTAGAT TTTCTTGGAG GGATAGTCCC TGACGATGTA             509

ACATGGAATA AACAACGGGC AGGATGCCAA CCATTAATGG CGCCGAAAGT AGTACATAAC          161912
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ACATGGAATA AACAACGGGC AGGATGCCAA CCATTAATGG CGCCGAAAGT AGTACATAAC             569

TGAAACTGAT TTGCAGGGTA GTTAGGAAAT TGGAATCCCA ACCATTAAGG GAGTATGGGT          161972
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TGAAACTGAT TTGCAGGGTA GTTAGGAAAT TGGAATCCCA ACCATTAAGG GAGTATGGGT             629

TTG                                                                        161975
|||                                                              
TTG                                                                           632


hqPGS_chr+_78119605-     (161359  161975)