Query EST sequence	XX (FILE: 28187641+])

         1  GCAGGCAGCG GCCTTCGCCT CATTAAAACA GTACCTGTCG CAGTTGGCAG TTCTTACAAG
        61  CCCCGACTCT TCGCTACCCC TGTTGCTCTA TGTTGNGGNT NCGCCGCATG CAGGTCAGNG
       121  CGGCACTGGT GCAGGAGCAG ACAATTGAGG GCGTGATCAG GCAGTGCCCA GTTTATTACG
       181  TCTCCGAAGT GCTAACACCG TCAAAATGTA ACATGTACAG AACTGGAGAA GATTGCCTAC
       241  GCAGTCGTTA TGTCTTCGCG CAAATTGCGC CATTATTTTG AAGCATTCAA AGTCCGAGTC
       301  ACCTCAGACA GGGGACTCGG TGAATTGTTC ANAAACCCGG AGGNATCGGT GAGGATTGCC
       361  AAATGGGCGG CCGAACTCTC CGGCTACCAC ATCAATTTCG AGCCCAGGAC AGCCATCAAG

Predicted gene structure (within BAC gi| 51315585 | segment 145206 to 145623):

 Exon  1      145206      145623 ( 418 n);        EST           1         420 ( 420 n); score:  0.919

MATCH   chr+ 28187641+        0.919   418  0.995  C
PGS_chr+_28187641+     (145206  145623)

Alignment:

GCAGGCAGCG GCCTTCGCCT CATTAAAACA GTACCTGTCG GAGTTGGCAG TCCTTACAAG          145265
|||||||||| |||||||||| |||||||||| ||||||||||  ||||||||| | ||||||||
GCAGGCAGCG GCCTTCGCCT CATTAAAACA GTACCTGTCG CAGTTGGCAG TTCTTACAAG              60

CCCCGACTCT TCACTACCTC TGTTGTTCTA TGTTGCGGCT TCGCCGCATG C-GGTCAGCG          145324
|||||||||| || ||||| | ||||| |||| ||||| || |  ||||||||| | |||||| |
CCCCGACTCT TCGCTACCCC TGTTGCTCTA TGTTGNGGNT NCGCCGCATG CAGGTCAGNG             120

CGGCGCTGGT GCAGGAGCAG ACAGTTGAGG GCGTGATCAG GCAGTGCCCA ATTTATTATG          145384
|||| ||||| |||||||||| ||| |||||| |||||||||| ||||||||||  ||||||| |
CGGCACTGGT GCAGGAGCAG ACAATTGAGG GCGTGATCAG GCAGTGCCCA GTTTATTACG             180

TCTCCGAAGT GCTGACGCCA TCCAAATGTA ACATG-ACAG AGCTGGAGAA GATTGCCTAC          145443
|||||||||| ||| || ||  || ||||||| ||||| |||| | |||||||| ||||||||||
TCTCCGAAGT GCTAACACCG TCAAAATGTA ACATGTACAG AACTGGAGAA GATTGCCTAC             240

GCAGTCGTTA TGTCTTCGCG CAAATTGCGC CATTATTTTG AAGCATTCAA GGTCCGGGTC          145503
|||||||||| |||||||||| |||||||||| |||||||||| ||||||||||  ||||| |||
GCAGTCGTTA TGTCTTCGCG CAAATTGCGC CATTATTTTG AAGCATTCAA AGTCCGAGTC             300

ACCTCAGACA GGGGACTCGG CGAACTGTTC AGAAACCCGG AAGCATCAGT GAGGATTGCC          145563
|||||||||| ||||||||||  ||| ||||| | |||||||| | | ||| || ||||||||||
ACCTCAGACA GGGGACTCGG TGAATTGTTC ANAAACCCGG AGGNATCGGT GAGGATTGCC             360

AAGTGGGCGG CTGAACTCTC TGGCTACCAC ATCAATTTCG AGCCCAGGAC AGCCATCAAG          145623
|| ||||||| | ||||||||  ||||||||| |||||||||| |||||||||| ||||||||||
AAATGGGCGG CCGAACTCTC CGGCTACCAC ATCAATTTCG AGCCCAGGAC AGCCATCAAG             420


hqPGS_chr+_28187641+     (145206  145623)