Query EST sequence	XX (FILE: 78085201-])

         1  cctcccattt attaccgcgg gcgccatagg ccttggatcc gtcacctcga atgacggcct
        61  gcgtacggag cttgatcgtt ccaggctccg ccgcctgcgg ctggaggagt ccaggtagta
       121  gtctctggtc tgcaaggacc cacctggcgg ctcggggtcg aagtcgtctt ccacagggat
       181  ttggccgtcg gagcgctcga cgatgtcggc cggtgtgtcc tccaggacgg acaggatggg
       241  agggaggcgg gagagcggcg gaggcgcgcg cccgaggcca atgccggcgc cggcgccggc
       301  gccgaacagg tatccatccc acgacgcgcg gggctcgtcc cacgagaagc cggcgtcatc
       361  gatggacatg cgcgaggcgt ccagggagaa acgcgggtcg gtgtcgcacg agcgccgccc
       421  accggcgagc tcggtgcctg cctccccacg gaggcggctc cggccaaaga acgacgcttt
       481  agagcgcttc tccggagggg gcattgccgc tgccgcgccc ttgctcaagg tagcctcctt
       541  cttgagcttc tgcttgcggc gccacttgtg ccacttcttg ctgaacacgg aggcggccca
       601  gaagctcccg gcgatctctt tcaggtcttt gggcgaagcc ttcttgttct ccgccgactc
       661  cagatcgatg tggtccttga tggccttacc tccctgggcc gccgcattgc tctcggctgc
       721  cacctcgccg gaaatgtcca tcgggacgac ggcagggccc tcctcgacca ccgggactat
       781  ctcgtcgggc tccatgacca ctgggatgtc ttcgtc                          

Predicted gene structure (within BAC gi| 51315585 | segment 92402 to 93202):

 Exon  1       93202       92402 ( 801 n);        EST           1         816 ( 816 n); score:  0.841

MATCH   chr- 78085201-        0.841   801  0.982  C
PGS_chr-_78085201-     (93202  92402)

Alignment:

CCCGGTCCCG TTTACCGCGG GCGCCATCGG CCTTGTTGGA TCCGTGACCT CGAAGGACGG           93143
||          ||||||||| ||||||| || ||   ||||| ||||| |||| |||| |||||
CCTCCCATTT ATTACCGCGG GCGCCATAGG CC---TTGGA TCCGTCACCT CGAATGACGG              57

CCTGCGTACG GAGCTCGAAC GTTCCAGGCT CCGGCGCCTG CGGCTGGAGG AGTCCAGGTA           93083
|||||||||| ||||| || | |||||||||| ||| |||||| |||||||||| ||||||||||
CCTGCGTACG GAGCTTGATC GTTCCAGGCT CCGCCGCCTG CGGCTGGAGG AGTCCAGGTA             117

GTAGTCTCTG GTCTGTAGCG AGCCACCGGG CGGGTCGGGG TCGAAGTCGT CTTCTACGGG           93023
|||||||||| ||||| |  | | ||||| || ||| |||||| |||||||||| |||| || ||
GTAGTCTCTG GTCTGCAAGG ACCCACCTGG CGGCTCGGGG TCGAAGTCGT CTTCCACAGG             177

GATCTGGCCA TCGGAGCGCT CGACGACGTC TGTCGGTGTG TCCTCCAGGA CGGACAGGAT           92963
||| |||||  |||||||||| |||||| |||  | ||||||| |||||||||| ||||||||||
GATTTGGCCG TCGGAGCGCT CGACGATGTC GGCCGGTGTG TCCTCCAGGA CGGACAGGAT             237

GGGAGGGAGG CGGGAGAGCG GCGGAGGCGC GCGCCCGAGC CCAATGCCGG CG-C--CG-C           92907
|||||||||| |||||||||| |||||||||| |||||||||  |||||||||| || |  || |
GGGAGGGAGG CGGGAGAGCG GCGGAGGCGC GCGCCCGAGG CCAATGCCGG CGCCGGCGCC             297

--CGCCGAAC AGGTACCCAT CCCAGGACGC GCGGGGCTCG TCCCATGAGA AGCCAGCGTC           92849
  |||||||| ||||| |||| |||| ||||| |||||||||| ||||| |||| |||| |||||
GGCGCCGAAC AGGTATCCAT CCCACGACGC GCGGGGCTCG TCCCACGAGA AGCCGGCGTC             357

GTCGATGGAC ATGCGCGCGG CGTCCAGGGA GAAACGCGGG TCGGTGTCGC ACGAGCGCCG           92789
 ||||||||| ||||||| || |||||||||| |||||||||| |||||||||| ||||||||||
ATCGATGGAC ATGCGCGAGG CGTCCAGGGA GAAACGCGGG TCGGTGTCGC ACGAGCGCCG             417

GCCATCGGCG AGCTCGGAGC CTGCCTCCCC ACGGAGCCGA CTCCGGCGAA GGAACGACGG           92729
 ||| ||||| ||||||| || |||||||||| |||||| ||  ||||||| ||  |||||||| 
CCCACCGGCG AGCTCGGTGC CTGCCTCCCC ACGGAGGCGG CTCCGGCCAA AGAACGACGC             477

CTTGGAGGGC TTCTCCGGAG GGGGCATTGC CGCTGCGGCG GCCTTGCTCA CGGCAGCCTC           92669
 || ||| || |||||||||| |||||||||| |||||| |||  |||||||||  || ||||||
TTTAGAGCGC TTCTCCGGAG GGGGCATTGC CGCTGCCGCG CCCTTGCTCA AGGTAGCCTC             537

CTTCTTGAGC TTCTGCTTGC GCCGCCACTT CTGCCACTTC TTGCTGAACA CGGAGGCGG-           92610
|||||||||| |||||||||| | ||||||||  ||||||||| |||||||||| ||||||||| 
CTTCTTGAGC TTCTGCTTGC GGCGCCACTT GTGCCACTTC TTGCTGAACA CGGAGGCGGC             597

-C-G-A-C-C CAGAAGCTAC CGGCGAGGTC TTTGGGCGAT GCCTTCTTGC TCTGCGCCGA           92555
 | | | | | | |  | |   |    ||||| |||||||||  |||||||||  ||| ||||||
CCAGAAGCTC CCGGCGATCT CTTTCAGGTC TTTGGGCGAA GCCTTCTTGT TCTCCGCCGA             657

CTCGAGATCG ATGTGATCCT TGATGGCCAT ACCTCTCT-- G-CGCCGCAT TGCCTCCGGC           92498
||| |||||| ||||| |||| |||||||| | ||||| ||   | |||||||| |||   ||||
CTCCAGATCG ATGTGGTCCT TGATGGCCTT ACCTCCCTGG GCCGCCGCAT TGCTCTCGGC             717

TTCCACCTCG CCAGAAATGT CCATCGGGAC GAC-G--GGG TCTTGCTCGA CCACCGGGAC           92441
| |||||||| || ||||||| |||||||||| ||| |  |||  | | ||||| ||||||||||
TGCCACCTCG CCGGAAATGT CCATCGGGAC GACGGCAGGG CCCTCCTCGA CCACCGGGAC             777

TATCTCGTCG GGCTCCATCA CCACTGGGAT GTCCTCGTC                                  92402
|||||||||| |||||||| | |||||||||| ||| |||||                       
TATCTCGTCG GGCTCCATGA CCACTGGGAT GTCTTCGTC                                    816


hqPGS_chr-_78085201-     (93202  92402)