Query EST sequence	XX (FILE: 60342279-])

         1  cgacagcgct ggtccgccgc atccgggggt ccatcaccac cactgcgaag ccctccctgc
        61  acttgcgcag cgcctgcgcc agcacggaca gcagcagctc aacttctaca tgacagatga
       121  atgaagaaga aaggaaggtc gaggagtgaa gcagtttgcg catgacccta aaattgcagc
       181  gactctttcc cggaatgata ttgagctcct ggccttcctg ttgaccatac gggaacgagg
       241  tgtataggta gaagtccaag agaacccagg atctgactgg gactcgctgt tgaagccaga
       301  gaaacctcca tggccggctg gggatgtccg gtcgcgagct gcctgcatag ctgatgggat
       361  tcgaagatgg cacgacagct gctcgcgcat aatcaggtca agccaatggg ggatttatga
       421  tttaggagta aatgtacgta tgacaactac tgttcacaat agtttgattg gtggaggatg
       481  tcacaatagg tatgtttaca attccactgc cggagacgaa attgaccatg gcatcgtcct
       541  ttggcttgtc ctctgaagcg ttctcttgat gtcactgttg agtgttcagg tca       

Predicted gene structure (within BAC gi| 51315585 | segment 162647 to 165729):

 Exon  1      165729      165644 (  86 n);        EST           1          86 (  86 n); score:  1.000
  Intron  1      165643      163363 ( 2281 n); Pd:  0.941 (s:  1.00), Pa:  0.008 (s:  0.98)
 Exon  2      163362      163312 (  51 n);        EST          87         137 (  51 n); score:  0.980
  Intron  2      163311      163239 (  73 n); Pd:  0.000 (s:  0.98), Pa:  0.308 (s:  1.00)
 Exon  3      163238      162980 ( 259 n);        EST         138         396 ( 259 n); score:  1.000
  Intron  3      162979      162844 ( 136 n); Pd:  0.998 (s:  1.00), Pa:  0.282 (s:  1.00)
 Exon  4      162843      162647 ( 197 n);        EST         397         593 ( 197 n); score:  1.000

MATCH   chr- 60342279-        0.998   593  1.000  C
PGS_chr-_60342279-     (165729  165644,163362  163312,163238  162980,162843  162647)

Alignment:

CGACAGCGCT GGTCCGCCGC ATCCGGGGGT CCATCACCAC CACTGCGAAG CCCTCCCTGC          165670
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CGACAGCGCT GGTCCGCCGC ATCCGGGGGT CCATCACCAC CACTGCGAAG CCCTCCCTGC              60

ACTTGCGCAG CGCCTGCGCC AGCACGGTAA TTTTGTCAAA CACCTCATGT GCGGTACATT          165610
|||||||||| |||||||||| ||||||                                     
ACTTGCGCAG CGCCTGCGCC AGCACG.... .......... .......... ..........              86

TCAGTATCAG AAGCGCTGGT TTTGTTTGGG TGTGCTTGCT TTACCCATTC GGTGGTGAGG          165550
                                                                 
.......... .......... .......... .......... .......... ..........              86

CGTTGGTGGC GCCCGCGGCC GCGGCCACGC TCGATAGGGC GTCGGCCGGT GACGAGCTCG          165490
                                                                 
.......... .......... .......... .......... .......... ..........              86

ACGAGGAGGA CGCCGAAGGA GTAGACGTCG CTGCGGTCGG TGAGCTGGCT TGTGCGCAGG          165430
                                                                 
.......... .......... .......... .......... .......... ..........              86

TACTCAGGGT CCACGTATCC GGCCGTTCCC TTTACTAGCG TTGACACGTG GGTCGCTTCA          165370
                                                                 
.......... .......... .......... .......... .......... ..........              86

GGGTTTTCGG GGGCTAGGCG CGCGAAGCCA AAATCGGCAA CCTTTGCTCG CAGGTGCTCT          165310
                                                                 
.......... .......... .......... .......... .......... ..........              86

GTTAGGAGAA TGTTGGACGA CTTAATGTCT CGGTGGATGA TTGGATGATC TGCTTCCCAT          165250
                                                                 
.......... .......... .......... .......... .......... ..........              86

CGTAGGAAAA TATTTGTCAG ACATAAGGAT GCTGAAGGTT TGGTATCCGC AGTAGATGTC          165190
                                                                 
.......... .......... .......... .......... .......... ..........              86

AATACATAGA CATGTTGGTG GCTGTCATAC AAAATTCTGA TCATGGAACT GAGATGGTGA          165130
                                                                 
.......... .......... .......... .......... .......... ..........              86

TTTTCATGAT GGTTGTCTCA TCTAGGGAAC TGATGTGTGA TGACATTCAG GACCACGATC          165070
                                                                 
.......... .......... .......... .......... .......... ..........              86

AAATATGCAC TTGTGGGGTT ATGCCAAATA TGAATATCAT ATGCATCTAA GTTTGGGGGC          165010
                                                                 
.......... .......... .......... .......... .......... ..........              86

TGACACAATT TTTCATATAG AAATGGAGAG TGTGTACCTG TATATCCGTG CAAGTAGGCA          164950
                                                                 
.......... .......... .......... .......... .......... ..........              86

ATGGCATGAA CTATATCAAT AGCAATGTTG AGACGCTGTG CAAATTCCAA TGGTTCCCCT          164890
                                                                 
.......... .......... .......... .......... .......... ..........              86

TTTGATCCTG CATGCATAGT GGCAAAGTGT GTCGCCATGT TCCCTTTAAT CCAATGGAAA          164830
                                                                 
.......... .......... .......... .......... .......... ..........              86

AACATGAAGA TTTATAGCAT TACATTCTAC AACATAATTT GGCTCCAAAA ATCAAGATGG          164770
                                                                 
.......... .......... .......... .......... .......... ..........              86

TTGGAACTGG GAACATAAAT AAAACATGGT TCAGACATGC AAAAAAAAAA CCCCACAGGC          164710
                                                                 
.......... .......... .......... .......... .......... ..........              86

TCAAGCTGAA TAGCATACAC ATGTTTTTAC ATCTCTTTCA GTAGATTAAC ATTTAGTATA          164650
                                                                 
.......... .......... .......... .......... .......... ..........              86

CCACAAGTGA CCTGTCATAC TCTATTTATA AACAATACTT CAATGCATTT AACTTCATCC          164590
                                                                 
.......... .......... .......... .......... .......... ..........              86

AGTTCTACTA TCTTGGACTC TTGGTGAGCG GTGACTTACA AAATTATAAC TTTTACCATC          164530
                                                                 
.......... .......... .......... .......... .......... ..........              86

TTGACAATAT TGCTACACTA CCACAAAAAA TGAAGTAGTA TGTGTTTAAG CTTGTCCATT          164470
                                                                 
.......... .......... .......... .......... .......... ..........              86

GCACATGTTT GACGTACCAT CCAAGTGTTG ACGGAGTGTT CCATTATTGA CGTACTCAAC          164410
                                                                 
.......... .......... .......... .......... .......... ..........              86

CAGAATTAAG CGTTCATCCT CGTATTCCAC ATACCCAAGA AACTTTACCA AGTTCAAATG          164350
                                                                 
.......... .......... .......... .......... .......... ..........              86

CTCGACCTTT GACAGGCTCT GGATCTCACT TCTGAACTCT TCAGATAGAT GCCCACCATG          164290
                                                                 
.......... .......... .......... .......... .......... ..........              86

CATCTGCCAA ATCCAGATGT TGCATCAAAA CTTTTTCTTG ATTTGATTGC TGCAAGTAAC          164230
                                                                 
.......... .......... .......... .......... .......... ..........              86

TCGGTGGAGT AAATATGTAC AACATTTCTT CTGTTGAAGG AATATTCACC TACAAACCTT          164170
                                                                 
.......... .......... .......... .......... .......... ..........              86

AGTAGCCCTC TTTACAGCTA TGATGGATCC ATCCCTGAGT TTCGCCTTAT ACACCGTGCC          164110
                                                                 
.......... .......... .......... .......... .......... ..........              86

AAAATTACCT AAACCAATTT TGTTTTGTTC ACTAAAGTTT GAAGTAGCCT GGCAAATTTC          164050
                                                                 
.......... .......... .......... .......... .......... ..........              86

CTGAAACGAG AACTGCTCTT GCCAGGACTT TGTTTGGCTG CTGTCACCTC TCTGCCGGGA          163990
                                                                 
.......... .......... .......... .......... .......... ..........              86

TATATTATGT ATATTATTGC TTGTGCTACT TGTCGATGAA ATTCTGGAGA CTGCAGGAAA          163930
                                                                 
.......... .......... .......... .......... .......... ..........              86

CAATTGGAAA CCATCTTAAT TGGACTCAGA TTTTATTTAA TAGTTGAGCA GTTTGATTAA          163870
                                                                 
.......... .......... .......... .......... .......... ..........              86

GAACACATCC TCACAAAGTA TATTCAGCAT TGAGCAGCTA TGTATGTCTT GTTTTGGGCC          163810
                                                                 
.......... .......... .......... .......... .......... ..........              86

ACATATGGCC ATATGGGCGC TATTGAGTTT TGTAACTTGC GTAAAGCTTA ACGATCGACC          163750
                                                                 
.......... .......... .......... .......... .......... ..........              86

GCAAAAGCAT GTGAATAGAA ATGTCAGTTG AAGAGCAATG CTAACTTGAA CTAGTTTCAA          163690
                                                                 
.......... .......... .......... .......... .......... ..........              86

TTCTGATTAG CTTATTAGGT GAAAACTGGA AACAGGAAGT GGCAGTGAAA ACCCAGATTG          163630
                                                                 
.......... .......... .......... .......... .......... ..........              86

TAGATCGGGA TTCCGAGTAA GCTCAAACTT ACTGGTAGGT TGACTAACCA AGTAACCATC          163570
                                                                 
.......... .......... .......... .......... .......... ..........              86

AGGCTGTATC ATGATATTTG TAACCCATAA GTCGAAGGTC GATTAGGACG GACTCCTTAT          163510
                                                                 
.......... .......... .......... .......... .......... ..........              86

AGGCTCATTG CTGATTTATG CCACAATCTT GCATTACCAT GATTAAAACC GTTTCTTCTA          163450
                                                                 
.......... .......... .......... .......... .......... ..........              86

TAGAATCTTA AAAGTCCTGA TGCGATTCAT GTGACTAATT AAATATTCAC GTCTCCTTTC          163390
                                                                 
.......... .......... .......... .......... .......... ..........              86

TAAATTCTAA CTCAGAAGTC GTTTCAGGAC AGCAGCAGCT CAGCTTCTAC ATGACAGATG          163330
                             ||| |||||||||| || ||||||| ||||||||||
.......... .......... .......GAC AGCAGCAGCT CAACTTCTAC ATGACAGATG             119

AATGAAGAAG AAAGGAAGGT GAGCTTACTG GGACTAGCAG ACACATCGTG GGCCTCGATC          163270
|||||||||| ||||||||                                              
AATGAAGAAG AAAGGAAG.. .......... .......... .......... ..........             137

GGAGGATTCT CATGTGCTTT CTTGACTTCA GGTCGAGGAG TGAAGCAGTT TGCGCATGAC          163210
                                  ||||||||| |||||||||| ||||||||||
.......... .......... .......... .GTCGAGGAG TGAAGCAGTT TGCGCATGAC             166

CCTAAAATTG CAGCGACTCT TTCCCGGAAT GATATTGAGC TCCTGGCCTT CCTGTTGACC          163150
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CCTAAAATTG CAGCGACTCT TTCCCGGAAT GATATTGAGC TCCTGGCCTT CCTGTTGACC             226

ATACGGGAAC GAGGTGTATA GGTAGAAGTC CAAGAGAACC CAGGATCTGA CTGGGACTCG          163090
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ATACGGGAAC GAGGTGTATA GGTAGAAGTC CAAGAGAACC CAGGATCTGA CTGGGACTCG             286

CTGTTGAAGC CAGAGAAACC TCCATGGCCG GCTGGGGATG TCCGGTCGCG AGCTGCCTGC          163030
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CTGTTGAAGC CAGAGAAACC TCCATGGCCG GCTGGGGATG TCCGGTCGCG AGCTGCCTGC             346

ATAGCTGATG GGATTCGAAG ATGGCACGAC AGCTGCTCGC GCATAATCAG GTACCATGTT          162970
|||||||||| |||||||||| |||||||||| |||||||||| ||||||||||           
ATAGCTGATG GGATTCGAAG ATGGCACGAC AGCTGCTCGC GCATAATCAG ..........             396

CTTCTGATTC TTAGCTTTTG TACACTCGGA GTTGATGGAG GATGGACTGA TTCAAGACTG          162910
                                                                 
.......... .......... .......... .......... .......... ..........             396

ATTCAAATTT TGACTGGGTG CATACATCTT TATTATCATA AAAAGGTGGT TGAAATGGGT          162850
                                                                 
.......... .......... .......... .......... .......... ..........             396

TTTCAGGTCA AGCCAATGGG GGATTTATGA TTTAGGAGTA AATGTACGTA TGACAACTAC          162790
      |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
......GTCA AGCCAATGGG GGATTTATGA TTTAGGAGTA AATGTACGTA TGACAACTAC             450

TGTTCACAAT AGTTTGATTG GTGGAGGATG TCACAATAGG TATGTTTACA ATTCCACTGC          162730
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TGTTCACAAT AGTTTGATTG GTGGAGGATG TCACAATAGG TATGTTTACA ATTCCACTGC             510

CGGAGACGAA ATTGACCATG GCATCGTCCT TTGGCTTGTC CTCTGAAGCG TTCTCTTGAT          162670
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CGGAGACGAA ATTGACCATG GCATCGTCCT TTGGCTTGTC CTCTGAAGCG TTCTCTTGAT             570

GTCACTGTTG AGTGTTCAGG TCA                                                  162647
|||||||||| |||||||||| |||                                        
GTCACTGTTG AGTGTTCAGG TCA                                                     593


hqPGS_chr-_60342279-     (165729  165644,163362  163312,163238  162980,162843  162647)