Query EST sequence	XX (FILE: 78024851-])

         1  gccgcgcccg cagtccacac agaatgtcgg acagggacgc cgtggccccc gcgggcggcg
        61  gtgaccggaa ggcggccaag ctcgggagct ggagcagcat gagcagcaac tacggcaaca
       121  agaagcggaa gagcagcagc agcagcttcg ggaggagatc cacatccacc tgcgaggaaa
       181  ggcagggggt cttccgcatg ctcatgagct ggaaccagga gagccggttc agcaacaaga
       241  tcaagacgac gacgagcaaa gaaagatgaa cgaaacgaag tgttcttagc ttggtgtgat
       301  tattcggggg gttgcttgct ggagggtttt tgttcgttta gtgtctagcc ttagcttact
       361  tattactttt gttagtactc tactagcaga gtacatgcat agagtcagtg gtgtggctgt
       421  ggcgtggatc agatcattga tttgatcgag ctgtacaaat agcgaggcga tacatgtcac
       481  tgagttgatc agttgacaag gtggtttgga ccatgttgag gcacggagaa acttcatccc
       541  taagttttag tttgtctggc tttgctcgtc attttgtact tgttcttctc acatatttgt
       601  tgcttagaat ttacttcaaa ctcacgtcct tttagcaata taatacacat ttgtacaaaa
       661  aaaaaaaaaa aaaa                                                  

Predicted gene structure (within BAC gi| 51315585 | segment 10611 to 11217):

 Exon  1       10611       11217 ( 607 n);        EST          59         657 ( 599 n); score:  0.952

MATCH   chr+ 78024851-        0.952   607  0.901  C
PGS_chr+_78024851-     (10611  11217)

Alignment:

CGGTGACCGG AAGGCGACCA AGCTCGGGAG CTGGAGCAGC ATGAGCAGCA ACTGCGGCAG           10670
|||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| ||| ||||| 
CGGTGACCGG AAGGCGGCCA AGCTCGGGAG CTGGAGCAGC ATGAGCAGCA ACTACGGCAA             118

CAAGAAGCGG AAGAGCAGCA GCAGCAGCTT CGGGAGGAGA CCCACATCCA CCTGCGAGGA           10730
|||||||||| |||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||
CAAGAAGCGG AAGAGCAGCA GCAGCAGCTT CGGGAGGAGA TCCACATCCA CCTGCGAGGA             178

AAGGCAGGGG GTCTTCCGCA TGCTCATGAG CTGGAACCAG GAGAGCCGGT TCAGCAACAA           10790
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
AAGGCAGGGG GTCTTCCGCA TGCTCATGAG CTGGAACCAG GAGAGCCGGT TCAGCAACAA             238

GATCAAGACG ATGACAAGCA AAGAAAGATG AATGAAACGA AGTGTTCTTA GCTTGGTGTG           10850
|||||||||| | ||| |||| |||||||||| || ||||||| |||||||||| ||||||||||
GATCAAGACG ACGACGAGCA AAGAAAGATG AACGAAACGA AGTGTTCTTA GCTTGGTGTG             298

ATTATTTGGG GGGTTGCTTG CTGGAGGGTT TTTGTTCGTT TAGTATCTAG CCTTAGCTTA           10910
|||||| ||| |||||||||| |||||||||| |||||||||| |||| ||||| ||||||||||
ATTATTCGGG GGGTTGCTTG CTGGAGGGTT TTTGTTCGTT TAGTGTCTAG CCTTAGCTTA             358

CTTATTACTT TTGTTAGTAC TCTACTAGCA GAGTATATGC ATAGAGTCAG TGGTGTGGCT           10970
|||||||||| |||||||||| |||||||||| ||||| |||| |||||||||      |||| |
CTTATTACTT TTGTTAGTAC TCTACTAGCA GAGTACATGC ATAGAGTCA- ----GTGG-T             412

GTGGCGTGGT GGCGTGGATC AGATCATTGA TTTGATCGAG CTGTACAAAT AGTGAAGCGA           11030
||||| | || |||||||||| |||||||||| |||||||||| |||||||||| || || ||||
GTGGC-T-GT GGCGTGGATC AGATCATTGA TTTGATCGAG CTGTACAAAT AGCGAGGCGA             470

TACATGTCAC TGAGTTGATC AGTTGACAAG GTGGTTTGGA CCATGTTGAG GCACAGAGAA           11090
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| |||||
TACATGTCAC TGAGTTGATC AGTTGACAAG GTGGTTTGGA CCATGTTGAG GCACGGAGAA             530

ACTTCATCCC TGAGTTTTAG TTTGTCTGGC TCTGCTCGTC ACTTTGTACA TGTTCTTCTC           11150
|||||||||| | |||||||| |||||||||| | |||||||| | |||||||  ||||||||||
ACTTCATCCC TAAGTTTTAG TTTGTCTGGC TTTGCTCGTC ATTTTGTACT TGTTCTTCTC             590

ACACATATGT TGCGTAGAAT TTACTTCAAA CTCACGTCCT TTTAGCAATA TAACACACAT           11210
||| || ||| ||| |||||| |||||||||| |||||||||| |||||||||| ||| ||||||
ACATATTTGT TGCTTAGAAT TTACTTCAAA CTCACGTCCT TTTAGCAATA TAATACACAT             650

TTGTACA                                                                     11217
|||||||                                                          
TTGTACA                                                                       657


hqPGS_chr+_78024851-     (10611  11217)