Query EST sequence XX (FILE: 50331155-]) 1 ggcgacaagc tgaccggagt gaccggcggc gaccaggtcg ctgccgcgat gggcatctac 61 ggccctcgca cgacctacat tgtcgccctc aaggactgcc ctgggacgca cgagttcctc 121 ctcctcgacg aaggtaaatg gcagcatgtg aaggacacca cgaccattgg ggaagggaag 181 atgttctctc ctggtaatct gagggcgaca ttcgataacc ctgagtacga caagctcatc 241 aactactacg tcaaggagaa gtacacattg cgctacactg gaggaatggt tcccgatgtc 301 aaccagatca tagtgaagga gaagggcatc ttcaccaacg tgacgtcccc gacggccaag 361 gccaagctgc ggctcctctt cgaggtggcg cccctgggct tcttgatgga gaaggccggc 421 gggtacagca gcgacggcaa gcagtcggtg ctggacaggg tgatcaacga gctcgacgag 481 cggacccagg tggcctatgg gtccaagaac gagatcatcc ggttcgagga gaccctttac 541 ggctcgtcca ggctcgccgc cagcgccacc gccaccgccc gcgcccttat ctgaattact 601 agaatccggg ctcgtagatg ctggagtaca cagtacaggg aaattgccca cttttttcat 661 caacttaagt ttttagatta aacttttttg aaacaatcaa aaaaaaaaaa aaaaaaaaaa 721 aaag Predicted gene structure (within BAC gi| 51315585 | segment 102710 to 104239): Exon 1 104239 104006 ( 234 n); EST 1 234 ( 234 n); score: 1.000 Intron 1 104005 103895 ( 111 n); Pd: 1.000 (s: 1.00), Pa: 0.817 (s: 1.00) Exon 2 103894 103823 ( 72 n); EST 235 306 ( 72 n); score: 1.000 Intron 2 103822 103165 ( 658 n); Pd: 0.998 (s: 1.00), Pa: 0.697 (s: 1.00) Exon 3 103164 102762 ( 403 n); EST 307 709 ( 403 n); score: 0.983 Intron 3 102761 102725 ( 37 n); Pd: 0.000 (s: 0.88), Pa: 0.000 (s: 0.00) Exon 4 102724 102710 ( 15 n); EST 710 724 ( 15 n); score: 0.867 MATCH chr- 50331155- 0.990 724 1.000 C PGS_chr-_50331155- (104239 104006,103894 103823,103164 102762,102724 102710) Alignment: GGCGACAAGC TGACCGGAGT GACCGGCGGC GACCAGGTCG CTGCCGCGAT GGGCATCTAC 104180 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCGACAAGC TGACCGGAGT GACCGGCGGC GACCAGGTCG CTGCCGCGAT GGGCATCTAC 60 GGCCCTCGCA CGACCTACAT TGTCGCCCTC AAGGACTGCC CTGGGACGCA CGAGTTCCTC 104120 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGCCCTCGCA CGACCTACAT TGTCGCCCTC AAGGACTGCC CTGGGACGCA CGAGTTCCTC 120 CTCCTCGACG AAGGTAAATG GCAGCATGTG AAGGACACCA CGACCATTGG GGAAGGGAAG 104060 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CTCCTCGACG AAGGTAAATG GCAGCATGTG AAGGACACCA CGACCATTGG GGAAGGGAAG 180 ATGTTCTCTC CTGGTAATCT GAGGGCGACA TTCGATAACC CTGAGTACGA CAAGGTACTC 104000 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| ATGTTCTCTC CTGGTAATCT GAGGGCGACA TTCGATAACC CTGAGTACGA CAAG...... 234 CGTTACTGGC TCCTGTTACT GTCAGTATTT TTTTTTCTTC TTCTTAATAT CTGCTACGGC 103940 .......... .......... .......... .......... .......... .......... 234 TTTCTGTGCG CGCCTAATCG GTGCTACAAA TATATGTATC TTCAGCTCAT CAACTACTAC 103880 ||||| |||||||||| .......... .......... .......... .......... .....CTCAT CAACTACTAC 249 GTCAAGGAGA AGTACACATT GCGCTACACT GGAGGAATGG TTCCCGATGT CAACCAGGTA 103820 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||| GTCAAGGAGA AGTACACATT GCGCTACACT GGAGGAATGG TTCCCGATGT CAACCAG... 306 CATACGTATA TATCACAAAA ACTTTAAATA ATTCACACCC TTAGGGCTTG TTCGGTTAGC 103760 .......... .......... .......... .......... .......... .......... 306 TCTCAATCCA TATGGATTGA GTGGGATTGG GTGGGATTAA ATCCCAAGCA AGTCAAAGTT 103700 .......... .......... .......... .......... .......... .......... 306 CTTCTAAATT TTTTCCAATC CCATTCAATC CATGTATAAT AGGAATAACC GAACAAACCC 103640 .......... .......... .......... .......... .......... .......... 306 TTAGTAAACC ACACAGAAAA ATCCCGACAC CTCACAACCC GTACGTTCAC TCGATCGGAT 103580 .......... .......... .......... .......... .......... .......... 306 CACTAGCTTA ATTAGTAATC AGGAGTAGTA CATGTTCCAA AACCAAACAG ATCCATATAT 103520 .......... .......... .......... .......... .......... .......... 306 GATTAACCTG TCATGTCAAC TCTCTACACA CCTTGCACAC CAAAACAGCC AAATTTTCAG 103460 .......... .......... .......... .......... .......... .......... 306 AGAGGACGAC GGCGCAAACT TTTGAGAAGA AAGAATTTGG TTTGACGTTG CCAGTAAAAT 103400 .......... .......... .......... .......... .......... .......... 306 GTCTCGGGCT GTAGAGTCAC TGCAAGCCCA TGCTAGTGAA CATTGAGCTC TGTGTACCAG 103340 .......... .......... .......... .......... .......... .......... 306 CGTCTGCTTT AAAGCAAGGC CACGCCAAGC AACACAGCAA TTCCCTACAG TGACCCCCCA 103280 .......... .......... .......... .......... .......... .......... 306 ACCTCGCTTT CGCTTTAGGT CTTTTCCTAT GCCGCTTTCA GTACACAGAA CCTGCGTGAG 103220 .......... .......... .......... .......... .......... .......... 306 CACCAGCATA TATGCATGCA TATGATGCCT GTGAGTATGG TCGATGATGA CGCAGATCAT 103160 ||||| .......... .......... .......... .......... .......... .....ATCAT 311 AGTGAAGGAG AAGGGCATCT TCACCAACGT GACGTCCCCG ACGGCCAAGG CCAAGCTGCG 103100 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGTGAAGGAG AAGGGCATCT TCACCAACGT GACGTCCCCG ACGGCCAAGG CCAAGCTGCG 371 GCTCCTCTTC GAGGTGGCGC CCCTGGGCTT CTTGATGGAG AAGGCCGGCG GGTACAGCAG 103040 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCCTCTTC GAGGTGGCGC CCCTGGGCTT CTTGATGGAG AAGGCCGGCG GGTACAGCAG 431 CGACGGCAAG CAGTCGGTGC TGGACAGGGT GATCAACGAG CTCGACGAGC GGACCCAGGT 102980 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CGACGGCAAG CAGTCGGTGC TGGACAGGGT GATCAACGAG CTCGACGAGC GGACCCAGGT 491 GGCCTATGGG TCCAAGAACG AGATCATCCG GTTCGAGGAG ACCCTCTACG GCTCGTCCAG 102920 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| GGCCTATGGG TCCAAGAACG AGATCATCCG GTTCGAGGAG ACCCTTTACG GCTCGTCCAG 551 GCTCGCCGCC AGCGCCACCG CCACCGCCCG CGCCCTTATC TGAATTACTA GAATCCGGGC 102860 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTCGCCGCC AGCGCCACCG CCACCGCCCG CGCCCTTATC TGAATTACTA GAATCCGGGC 611 TCGTAGATGC TGGAGTACAC AGTACAGGGA AATTGCCCAC TTTTTTCATC AACTTAAGTT 102800 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGTAGATGC TGGAGTACAC AGTACAGGGA AATTGCCCAC TTTTTTCATC AACTTAAGTT 671 TTTAGATTAA ACTTTTTTGA AACAATCAGA CAGGAGATCT GTCTTATATA TTGATGAGGA 102740 |||||||||| |||||||||| |||||||| | | | | TTTAGATTAA ACTTTTTTGA AACAATCAAA AAAAAAAA.. .......... .......... 709 GAAAGATGCC CAAAGGCAAA AAAAAAAAAG 102710 ||| |||||||||| .......... .....AAAAA AAAAAAAAAG 724 hqPGS_chr-_50331155- (104239 104006,103894 103823,103164 102762)