Query EST sequence	XX (FILE: 5499245-])

         1  ccaaagaatt cggcacgacg tctagaggta gaggagtaga ttcctcacac cgggtaagtc
        61  tagctgagta ttagtatact cagccttgct agtggcataa ttttttgcag gtacgcttca
       121  tgatatggtt gatggtgtga attggcctac caccctgcca ccgggttgga cggtcgaatg
       181  ggatgctgct ctgaccggag aggagcagga ggagtagtgg gaaaggcctt gccctaatcc
       241  ttgctttcaa cgatatcaat tatctgctgc agtttatttt gtgaacttat atcagttgct
       301  gaaaaactct gatttatgta ataattccag tattttaaat tgaggttttc ctgttttatt
       361  gtatttcttc tgtgactcac cttcgagtga gtttgtggta tttgatcctg gttaagtggc
       421  tttatcagac tagatctgag ggactgacgg gttattccga tttaagtgtg ttacggcccc
       481  tgaggcgtga cttaggcact taagctggaa taattcgggc gttctgccac acccggcctc
       541  cgtggcctcc tcaacgggga gtaagttctt cggaaccgaa c                    

Predicted gene structure (within BAC gi| 51315585 | segment 75891 to 76417):

 Exon  1       75891       76417 ( 527 n);        EST           2         531 ( 530 n); score:  0.871

MATCH   chr+ 5499245-         0.871   527  0.907  C
PGS_chr+_5499245-     (75891  76417)

Alignment:

CAGCCAAACA GCTGCATAGT CTAGAGGTAG AGGAGTAGAC TCCTCACACC GGTTAAGTCT           75950
||   ||    |   |   || |||||||||| |||||||||  |||||||||| || |||||||
CAAAGAATTC GGCACGACGT CTAGAGGTAG AGGAGTAGAT TCCTCACACC GGGTAAGTCT              61

AGCTGAGTAT TAGTATACTC AGCCTTGCTT GTGGCACAAT TTT-TGCAGG TACCATTCAG           76009
|||||||||| |||||||||| |||||||||  |||||| ||| ||| |||||| |||  |||| 
AGCTGAGTAT TAGTATACTC AGCCTTGCTA GTGGCATAAT TTTTTGCAGG TACGCTTCAT             121

GAAATGGTTG ATGGTGTGAC TTGGCCTACC ACCCTGCCAC CGGGTTGGAC GGTCGAGTGG           76069
|| ||||||| |||||||||  |||||||||| |||||||||| |||||||||| |||||| |||
GATATGGTTG ATGGTGTGAA TTGGCCTACC ACCCTGCCAC CGGGTTGGAC GGTCGAATGG             181

GATGTTGCTC CGGCAGGAGA GGAGCACGAG GAGTAGTGGG CTAGGCCTTG CCCAGTTCCT           76129
|||| |||||  | | ||||| |||||| ||| ||||||||||   |||||||| |||   ||||
GATGCTGCTC TGACCGGAGA GGAGCAGGAG GAGTAGTGGG AAAGGCCTTG CCCTAATCCT             241

CGATACCGAC GACATCGATT ATCCGCTGCA TTTTATTTTG TGAACTCTTA TTTGCTACTC           76189
 | |  | || || ||| ||| ||| ||||||  ||||||||| ||||||  || |  | | || 
TGCTTTCAAC GATATCAATT ATCTGCTGCA GTTTATTTTG TGAACTTATA TCAGTTGCTG             301

AAAAACTCCG ATCTATGTAA TAATT-CAGC A-CTTAATTT GAGGTTTT-C TGTTTTATTG           76246
|||||||| | || ||||||| ||||| |||  |  |||| || |||||||| | ||||||||||
AAAAACTCTG ATTTATGTAA TAATTCCAGT ATTTTAAATT GAGGTTTTCC TGTTTTATTG             361

TATTTCTTCT GTGACTCACC TTCGAGTGAG ATTGTGGAAT TTGATCCTGG TTAAGTGGCT           76306
|||||||||| |||||||||| ||||||||||  |||||| || |||||||||| ||||||||||
TATTTCTTCT GTGACTCACC TTCGAGTGAG TTTGTGGTAT TTGATCCTGG TTAAGTGGCT             421

CTATCAGACT AGATCTGAGG GACTGACGGG TTATTCCGAT TTAAGTGTGT TACGGCCCCT           76366
 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TTATCAGACT AGATCTGAGG GACTGACGGG TTATTCCGAT TTAAGTGTGT TACGGCCCCT             481

GAGGCGTGAC TTAGGCACTT AAGCTGGAAT AATTCGGGTG GTTCTGCCAC A                    76417
|||||||||| |||||||||| |||||||||| ||||||||   |||||||||| |         
GAGGCGTGAC TTAGGCACTT AAGCTGGAAT AATTCGGG-C GTTCTGCCAC A                      531


hqPGS_chr+_5499245-     (75891  76417)