Query EST sequence XX (FILE: 19351179-]) 1 atattgcttc atgtctactc ccaaatgtta gaaaagaatt aaagtgtagg tgtccacatg 61 cgtgtgttct gcctccagaa atctcggtct gcaaactctc catctcgcgc cgaagctcgt 121 gagagggagc ggccacggca acggcgtgga ctggtgggcc ttcggcgtct tcctctacga 181 gctcgtctac ggccgcacgc ccttcaaggg ccacaccaag gaggccaccc tcaagaacat 241 cctctccaag caggccactt acctaggttt tagtttgtct ggctttgctc gtcattttgg 301 acttgttctt ctcacatatt tgttctctta gaatttactt caaactcacg tccttttggc 361 aatataacac acatgtatat acgttatcta tactactata tgtttccgtt gcaacgcacg 421 g Predicted gene structure (within BAC gi| 51315585 | segment 10075 to 11249): Exon 1 10075 10116 ( 42 n); EST 3 44 ( 42 n); score: 0.905 Intron 1 10117 10182 ( 66 n); Pd: 0.939 (s: 0.90), Pa: 0.000 (s: 0.94) Exon 2 10183 10388 ( 206 n); EST 45 262 ( 218 n); score: 0.830 Intron 2 10389 11099 ( 711 n); Pd: 0.000 (s: 1.00), Pa: 0.000 (s: 0.88) Exon 3 11100 11249 ( 150 n); EST 263 411 ( 149 n); score: 0.870 MATCH chr+ 19351179- 0.847 398 0.945 C PGS_chr+_19351179- (10075 10116,10183 10388,11100 11249) Alignment: ATTGCTTCAT GTCTACCCCA AAATGTTAGA AAAGAAGAAA AGGTATCATC CTTAATTTTT 10134 |||||||||| |||||| || |||||||||| |||||| || || ATTGCTTCAT GTCTACTCCC AAATGTTAGA AAAGAATTAA AG........ .......... 44 TTCTCATATC AGCAACATAG ATTTATTTAC AACTAATTAA GTACTCAGTG TAGGCGTCCA 10194 || |||| ||||| .......... .......... .......... .......... ........TG TAGGTGTCCA 56 CATGCGTGTG TTCTGCCTCC ATAAATCTTG GTCTGCAAAC TCTCCATCT- -CG-C-ACGC 10250 |||||||||| |||||||||| | |||||| | |||||||||| ||||||||| || | | || CATGCGTGTG TTCTGCCTCC AGAAATCTCG GTCTGCAAAC TCTCCATCTC GCGCCGAAGC 116 -C-------G GAGCGGCCAC GGCAACGACG TGGACTGGTG GGCCTTCGGC GTCTTCCTCT 10302 | | |||||||||| ||||||| || |||||||||| |||||||||| |||||||||| TCGTGAGAGG GAGCGGCCAC GGCAACGGCG TGGACTGGTG GGCCTTCGGC GTCTTCCTCT 176 ACGAGCTCGT CTACGGCCGC ACGCCCTTCA AGGGCCACAC CAAGGAGGCC ACCCTCAAGA 10362 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACGAGCTCGT CTACGGCCGC ACGCCCTTCA AGGGCCACAC CAAGGAGGCC ACCCTCAAGA 236 ACATCCTCTC CAAGCAGGCC ACTTACCCTC AGCTGGACGG CGAGGCCGAC GCCTCCGATC 10422 |||||||||| |||||||||| |||||| ACATCCTCTC CAAGCAGGCC ACTTAC.... .......... .......... .......... 262 CCAGCTGCGG GACCTCGTGG GGCTGTTGCT GGAGCGCGAC CTGCGCCGCC GCATGGGCGT 10482 .......... .......... .......... .......... .......... .......... 262 CACGCGCGGC GCCACCGAGA TCAAGCGGCA CCCGTTCTTC GCCAGCGTGG ACTGGGCGCT 10542 .......... .......... .......... .......... .......... .......... 262 CATCCGGTGC GTGGCGCCAC CAGTGGTGCC GGACAGGGAC GCTGTGGCCC CCGCGGGCGG 10602 .......... .......... .......... .......... .......... .......... 262 CGGTGAGCCG GTGACCGGAA GGCGACCAAG CTCGGGAGCT GGAGCAGCAT GAGCAGCAAC 10662 .......... .......... .......... .......... .......... .......... 262 TGCGGCAGCA AGAAGCGGAA GAGCAGCAGC AGCAGCTTCG GGAGGAGACC CACATCCACC 10722 .......... .......... .......... .......... .......... .......... 262 TGCGAGGAAA GGCAGGGGGT CTTCCGCATG CTCATGAGCT GGAACCAGGA GAGCCGGTTC 10782 .......... .......... .......... .......... .......... .......... 262 AGCAACAAGA TCAAGACGAT GACAAGCAAA GAAAGATGAA TGAAACGAAG TGTTCTTAGC 10842 .......... .......... .......... .......... .......... .......... 262 TTGGTGTGAT TATTTGGGGG GTTGCTTGCT GGAGGGTTTT TGTTCGTTTA GTATCTAGCC 10902 .......... .......... .......... .......... .......... .......... 262 TTAGCTTACT TATTACTTTT GTTAGTACTC TACTAGCAGA GTATATGCAT AGAGTCAGTG 10962 .......... .......... .......... .......... .......... .......... 262 GTGTGGCTGT GGCGTGGTGG CGTGGATCAG ATCATTGATT TGATCGAGCT GTACAAATAG 11022 .......... .......... .......... .......... .......... .......... 262 TGAAGCGATA CATGTCACTG AGTTGATCAG TTGACAAGGT GGTTTGGACC ATGTTGAGGC 11082 .......... .......... .......... .......... .......... .......... 262 ACAGAGAAAC TTCATCCCTG AGTTTTAGTT TGTCTGGCTC TGCTCGTCAC TTTGTACATG 11142 || ||||||||| ||||||||| ||||||||| |||| || || .......... .......CTA GGTTTTAGTT TGTCTGGCTT TGCTCGTCAT TTTGGACTTG 305 TTCTTCTCAC ACATATGTT- GCGTAGAATT TACTTCAAAC TCACGTCCTT TTAGCAATAT 11201 |||||||||| | || |||| | ||||||| |||||||||| |||||||||| || ||||||| TTCTTCTCAC ATATTTGTTC TCTTAGAATT TACTTCAAAC TCACGTCCTT TTGGCAATAT 365 AACACACATT TGTACACACG TTATCTATAT TACTATATGT TTCCATTG 11249 |||||||| |||| | ||| ||||||||| |||||||||| |||| ||| AACACACA-- TGTATATACG TTATCTATAC TACTATATGT TTCCGTTG 411 hqPGS_chr+_19351179- (10075 10116,10183 10388,11100 11249)