Query EST sequence	XX (FILE: 24764857-])

         1  tgtgagaatc tactggtgaa catgagggat ccgcagcgac caatctgcaa gatcggtgat
        61  cttggactgt caaaggttaa acagcatact ttggtatctg gtggtgttag aggaacctta
       121  ccatggatgg caccagagct tctgagtggg aaaagtaata tggtgtcaga caagattgat
       181  gtctattcgt ttggaattgt catgtgggag ttgcttactg gggaagagcc atactctggc
       241  atgcgtgctg ctgaaattat tgggggcatt gtaaacgatt ccctacgtcc tcaaattcct
       301  tcgtggtgtg atcctgagtg gaaggggttg atggaaagct gttggtccag tgatccagct
       361  gagagaccgt ccttcacgga tatatctcaa aggttgagga aaatggccgc cgcaatgaat
       421  gtgaagtaaa ggtccggaag ccatatttgt cttgtatgtg tgttccccac atccaatata
       481  tatatagcga tatacaagag gaaggcagag ttcaaacagg attattttga gtaaatatgt
       541  ccatatgtct tggcagcatc gcagttgatg accctactcc aagtgataat ttatcaagtg
       601  ctgacttcat gggagaaaat ctatgtcatg gagattccaa agcatgtttg atgtgagtct
       661  gccgttcggt gtgtgtttaa aaaaaggggg ggcccggtac cca                  

Predicted gene structure (within BAC gi| 51315585 | segment 5700 to 8493):

 Exon  1        5700        5756 (  57 n);        EST          98         150 (  53 n); score:  0.632
  Intron  1        5757        5874 ( 118 n); Pd:  0.000 (s:  0.62), Pa:  0.988 (s:  0.00)
 Exon  2        5875        5883 (   9 n);        EST         151         158 (   8 n); score:  0.556
  Intron  2        5884        6185 ( 302 n); Pd:  0.900 (s:  0.00), Pa:  0.593 (s:  0.00)
 Exon  3        6186        6203 (  18 n);        EST         159         174 (  16 n); score:  0.667
  Intron  3        6204        7297 ( 1094 n); Pd:  0.000 (s:  0.00), Pa:  0.934 (s:  0.98)
 Exon  4        7298        7385 (  88 n);        EST         175         262 (  88 n); score:  0.977
  Intron  4        7386        8088 ( 703 n); Pd:  0.966 (s:  0.96), Pa:  0.862 (s:  0.98)
 Exon  5        8089        8493 ( 405 n);        EST         263         670 ( 408 n); score:  0.965

MATCH   chr+ 24764857-        0.933   577  0.821  C
PGS_chr+_24764857-     (5700  5756,5875  5883,6186  6203,7298  7385,8089  8493)

Alignment:

CTGGCAGTGC TTGGGGAGAA GACAACATTG ATGTCTCCAG ATGTTCTTGT AGCCGTGGTG            5759
||||  |||  | | ||| |     | ||| | ||| | |||| |  ||| ||  ||  | |   
CTGGTGGTGT TAGAGGA-AC CTTACCATGG ATGGCACCAG AGCTTC-TG- AG-TGGG...             150

TGCCCTACTG TAGGTACAAG CTCTGAAATG GCTAGAGTTT CCATTGGGTC AAATGTTCAT            5819
                                                                 
.......... .......... .......... .......... .......... ..........             150

GATATTTTCA GACATCAGAT CTTATGATTT TTTTTGCTGA TATGTACTGT TTCAGGTTAG            5879
                                                               ||
.......... .......... .......... .......... .......... .....AAAAG             155

TACAGTATCC TGGAGAGTTT GTGGTGACAT TCCCAAGGGC ATACCACATT GGGTTTAGTC            5939
|| |                                                             
TA-A...... .......... .......... .......... .......... ..........             158

ATGGTTAGTT ATGCCATTGA ACTAATGATG CCTTTTTGGC ACAGCTTTAT TGAATTGATT            5999
                                                                 
.......... .......... .......... .......... .......... ..........             158

GTGATGTGCT ATTTGTTAAC TATGTTTATT CCAGCTTTGC TAGATTTTCA CCTTCATGGT            6059
                                                                 
.......... .......... .......... .......... .......... ..........             158

ATGAGCAGTA TAAACAAAAT AATAATGGTT TCATGGACAA TCCTTAAATG GATCAGTGCT            6119
                                                                 
.......... .......... .......... .......... .......... ..........             158

CCCCTCATCA GTTATATAAC AAACTGAGGG TGCTCGAGAT ATCTCTACTA CTCTATATGT            6179
                                                                 
.......... .......... .......... .......... .......... ..........             158

TCTTAGTGTA GGCGTCCACA CAGGGTCTGT TCTGCCCGCC GCGAGCACGC CGCGATTTCT            6239
      | |  || || || | || |                                       
......TAT- GGTGT-CAGA CAAG...... .......... .......... ..........             174

CCACGCGCAG CCCTCGCAAT CCGCCGCCTT TCCATCCGCG GCCAATCCGC CGCGCCAAAT            6299
                                                                 
.......... .......... .......... .......... .......... ..........             174

CCGCCGCCAC ACTCCCTGCG CCCGCAACGC CCGCCCGCCG CGATTTCTCC ACCCGCAGCC            6359
                                                                 
.......... .......... .......... .......... .......... ..........             174

CCCCGCAATC CGCCGCCTTT CCATCCGCGG CCGCAATCGT TTCCATCCGC GGCTGCAATC            6419
                                                                 
.......... .......... .......... .......... .......... ..........             174

CACCGCGCCA AATCCGCCGC CACACCCCTG CGCCCGCAAC GCCCACCACT GCGCCGCCCT            6479
                                                                 
.......... .......... .......... .......... .......... ..........             174

TCCATCCACG CGCAGCATGC CGCGATCCAC AACTGTTGTG CCATCCTCGC CTCGCATGCC            6539
                                                                 
.......... .......... .......... .......... .......... ..........             174

ACGCCATCCC CCCGATCGTC GGTGTCGCCC AAAAACCGCG CGGCCCTTCC ATCCACGCGC            6599
                                                                 
.......... .......... .......... .......... .......... ..........             174

ATCCGTCGTC GGCAAAGTCT GGGCCACCGT GGTCAAGCTT GCTGATGTCG CCATCCTGTA            6659
                                                                 
.......... .......... .......... .......... .......... ..........             174

GCACTTCACC GCGGGGTGGT CTTTGTGACG AATCGTCGTC AAGCTAGATC TGCAGCGGTC            6719
                                                                 
.......... .......... .......... .......... .......... ..........             174

AGGGGCGGAT TTGGGACTAA CGAGCCACTG CTCCCGATGG CGGCATTCGC AGCCCCTTCC            6779
                                                                 
.......... .......... .......... .......... .......... ..........             174

TTGTCCTCGC GCATCCTCCT CGCCTCGCCC CACTCCCCGC CCACTCTCCT CCGCCTGCGC            6839
                                                                 
.......... .......... .......... .......... .......... ..........             174

CGCGCGGGCG GCCGCTCTCT GGAGCTGTCG TCACGGCGCG GCGGGAGCGC GCGCCTTCGG            6899
                                                                 
.......... .......... .......... .......... .......... ..........             174

GTCGTTCGAC GAGCGGTGAC GGAGGAGGAT AGCGGGACCG CGCGCGGAGA CGAGGAGGTG            6959
                                                                 
.......... .......... .......... .......... .......... ..........             174

GAGGAGGCCC CGGAGGAACC AGTGGCTGGC CGCGACCTCA TCACGCTCGC CGCCTGCCTC            7019
                                                                 
.......... .......... .......... .......... .......... ..........             174

GTGGGCCTCC TCACCGGCGT CTCCATCGTG CTCTTCAACC TCTCGGTAGG TAGCCACCTA            7079
                                                                 
.......... .......... .......... .......... .......... ..........             174

GCGAGCTCGG TTTCATGTTT TCATCCCCGG TGCCAAACGG AGGCCGTAGT ACGTTTGAAC            7139
                                                                 
.......... .......... .......... .......... .......... ..........             174

TTCAGAGGCG AATTGGTTGA AGGCAACTGA ACAGCGGGTT TGGTCTTAAT TTTGACATTC            7199
                                                                 
.......... .......... .......... .......... .......... ..........             174

AGCACTGCTT TGTCTTGTAA GTACATTTAA TAAACCATAT TAAACAATGA TCCACTTTTT            7259
                                                                 
.......... .......... .......... .......... .......... ..........             174

TGTATTCTGA CAAAAAACTA TTTCTATGTA TCTTGTAGAT TGATGTCTAT TCGTTTGGAA            7319
                                         || |||||||||| ||||||||||
.......... .......... .......... ........AT TGATGTCTAT TCGTTTGGAA             196

TTGTCATGTG GGAGTTGCTT ACTAGGGAAG AGCCATACTC TGGTATGCGT GCTGCTGAAA            7379
|||||||||| |||||||||| ||| |||||| |||||||||| ||| |||||| ||||||||||
TTGTCATGTG GGAGTTGCTT ACTGGGGAAG AGCCATACTC TGGCATGCGT GCTGCTGAAA             256

TTATTGGTAA TGTCCAAAGT TCCCTATATG TACAATTCTA TGCCTTGATC TGTTATGACA            7439
||||||                                                           
TTATTG.... .......... .......... .......... .......... ..........             262

CTTTCCACCA TGTTCTGACC TTACCTTTTG ATATATCTTA GTTAGAATAA GTTGTGGACT            7499
                                                                 
.......... .......... .......... .......... .......... ..........             262

TAAGAACTGT GAACAGAGAA AGTTTATCTT CTAGAATTTA CTTGTTTGGA TTTGGATGCA            7559
                                                                 
.......... .......... .......... .......... .......... ..........             262

GCTTTGAAAG AACAAATAAG GCTGAGCTAA TAGAAAAGAA GGTTGTATGT TTAGTGGACA            7619
                                                                 
.......... .......... .......... .......... .......... ..........             262

TATAAATGGG TCAGTTGTAA ATCCCCAAAT ATCTTGAGTA ATGAAGGTGG GACATATAAT            7679
                                                                 
.......... .......... .......... .......... .......... ..........             262

TAAATAGCGG ACTTCAATAC AAAACCAGAT TATGTAGTTG GCGCCGTAGC TTGAATCGGA            7739
                                                                 
.......... .......... .......... .......... .......... ..........             262

TTATTTGCAG CTGCAATAAT GATGAAGGTT GAAGGATATA ACAATCTAGG TGTATGGTGT            7799
                                                                 
.......... .......... .......... .......... .......... ..........             262

AATTATGTGA TTGCACTTGC AGAATGTTTT TCTTTTTTGG ATTTTCCTTT GATAGCATGA            7859
                                                                 
.......... .......... .......... .......... .......... ..........             262

CTTTTTCTCC CTTTGCATAG TAACATTGGA CAAACCAATG ACAAATTGGT AGATGTGGAT            7919
                                                                 
.......... .......... .......... .......... .......... ..........             262

TTGCCCGACA TTGTGATGCA CTGCTGCATC ATATTCAATA ACAGATGTAC TACAGTATAC            7979
                                                                 
.......... .......... .......... .......... .......... ..........             262

AGATAGGGGA TTTATGTTGA TTTTTGAATC TTTAGTCATA AATATATCTC GCCTAGGCTT            8039
                                                                 
.......... .......... .......... .......... .......... ..........             262

GTTGTTATTA TGTCACAGCA GTGATCTGAT TACAATGCCT TTTTTCTAGG GGGCATTGTA            8099
                                                     | ||||||||||
.......... .......... .......... .......... .........G GGGCATTGTA             273

AACGATTCCC TACGTCCTCA AATTCCTTCA TGGTGTGATC CTGAGTGGAA GGGGTTGATG            8159
|||||||||| |||||||||| |||||||||  |||||||||| |||||||||| ||||||||||
AACGATTCCC TACGTCCTCA AATTCCTTCG TGGTGTGATC CTGAGTGGAA GGGGTTGATG             333

GAAAGCTGTT GGTCCAGTGA TCCAGCTGAG AGACCGTCCT TCACGGATAT ATCTCAAAGG            8219
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GAAAGCTGTT GGTCCAGTGA TCCAGCTGAG AGACCGTCCT TCACGGATAT ATCTCAAAGG             393

TTGAGGAAAA TGGCCGCCGC AATGAATGTG AAGTAAAGGT CCGGAAGCCA TATTTGTCTT            8279
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TTGAGGAAAA TGGCCGCCGC AATGAATGTG AAGTAAAGGT CCGGAAGCCA TATTTGTCTT             453

GTATGTG--T TCCCCACATC C-A-ATATAT ATAGCGATAT ACAAGACGAA GGCAGAGTTC            8335
|||||||  | |||||||||| | | |||||| |||||||||| |||||| ||| ||||||||||
GTATGTGTGT TCCCCACATC CAATATATAT ATAGCGATAT ACAAGAGGAA GGCAGAGTTC             513

AAACAGGATT ATTTTGAGTA AATATGTTCC ATATGTCTTG GCAGCATCGC AGTTGATGAC            8395
|||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| ||||||||||
AAACAGGATT ATTTTGAGTA AATATG-TCC ATATGTCTTG GCAGCATCGC AGTTGATGAC             572

CCTACTCCAA GTGATAATTT ATCAAGTGCT GACTTCATGG GAGAACATCT ATGTCATGGA            8455
|||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| ||||||||||
CCTACTCCAA GTGATAATTT ATCAAGTGCT GACTTCATGG GAGAAAATCT ATGTCATGGA             632

GATTCCAAAG CATGTTTGAT GTGAGTCTGC CGTTCGGT                                    8493
|||||||||| |||||||||| |||||||||| ||||||||                        
GATTCCAAAG CATGTTTGAT GTGAGTCTGC CGTTCGGT                                     670


hqPGS_chr+_24764857-     (7298  7385,8089  8493)