Query EST sequence XX (FILE: 32859895-]) 1 ggtttcttag taaatctaca ggagattgcc ccacaatatg ctggagtcct acatggaatg 61 tcaaatacag ctgggacatt tgctgccatt ctaggaacta ttggagcagg gtttttttgt 121 tgataggatg ggttctttcc gtggattttt gatattgacg tcgctcttat acttcagcag 181 tgctcttttc tgggacatct ttgctactgg agagcgtgtt gattttgatg gcactggcta 241 gcaactcaga ggaactctgc ggttttctgt ccttaaaaca cataatgttg attcaggaca 301 gtgtttttac cgccaaccat caagaagtta tttgcacctg atgataaaca acttcagtta 361 cgactgtaca gtattgggtt caacttttta aagcacgcag tgagtttatc ttggatgtcg 421 agtatcagtg atagataaac acacgctgtg agtttatctt ggaagttgaa tatcagtgat 481 ggataaacac atggaactgt ctttatagat cgttttagat tttcttggag ggatagtccc 541 tgacgatgta acatggaata aacaacaggt aggatgccaa ccattaatgg cgccgaaagt 601 agtacataac tgaaactgat ttgcagggta gttaggaaat tggaatccca accattaagg 661 gagtatgggt ttgaaaaaca tgtgaatctg gtgtacatgc tactgaaagt tgtgccctcg 721 ttggctcgtt cc Predicted gene structure (within BAC gi| 51315585 | segment 161120 to 162032): Exon 1 161120 161140 ( 21 n); EST 1 21 ( 21 n); score: 1.000 Intron 1 161141 161233 ( 93 n); Pd: 0.616 (s: 0.00), Pa: 0.595 (s: 0.00) Exon 2 161234 161267 ( 34 n); EST 22 55 ( 34 n); score: 1.000 Intron 2 161268 161358 ( 91 n); Pd: 0.412 (s: 0.00), Pa: 0.955 (s: 1.00) Exon 3 161359 162032 ( 674 n); EST 56 730 ( 675 n); score: 0.990 MATCH chr+ 32859895- 0.990 729 0.996 C PGS_chr+_32859895- (161120 161140,161234 161267,161359 162032) Alignment: GGTTTCTTAG TAAATCTACA GGTACTTTAG TTCAGTGATG GAACAGACAC TCGTTCTTCT 161179 |||||||||| |||||||||| | GGTTTCTTAG TAAATCTACA G......... .......... .......... .......... 21 CCATTTGGAT CTTCTTTTTC CCATCTGATA TATATCATTT CTAAAATGTA ACAGGAGATT 161239 |||||| .......... .......... .......... .......... .......... ....GAGATT 27 GCCCCACAAT ATGCTGGAGT CCTACATGGT ACTAACTAGT AAATATGCTC CTTGTGTTAG 161299 |||||||||| |||||||||| |||||||| GCCCCACAAT ATGCTGGAGT CCTACATG.. .......... .......... .......... 55 CTAATATATT TCCATTTTGT TGCATTAACT AACTTTGATC TACAATTGTG CTGTGACAGG 161359 | .......... .......... .......... .......... .......... .........G 56 AATGTCAAAT ACAGCTGGGA CATTTGCTGC CATTCTAGGA ACTATTGGAG CAGGG-TTTT 161418 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| AATGTCAAAT ACAGCTGGGA CATTTGCTGC CATTCTAGGA ACTATTGGAG CAGGGTTTTT 116 TTGTTGATAG GATGGGTTCT TTCCGTGGAT TTTTGATATT GACGTCGCTC TTATACTTCA 161478 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGTTGATAG GATGGGTTCT TTCCGTGGAT TTTTGATATT GACGTCGCTC TTATACTTCA 176 GCAGTGCTCT TTTCTGGGAC ATCTTTGCTA CTGGAGAGCG TGTTGATTTT GATGGCACTG 161538 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCAGTGCTCT TTTCTGGGAC ATCTTTGCTA CTGGAGAGCG TGTTGATTTT GATGGCACTG 236 GCTAGCAACT CAGAGGAACT CTGCGGTTTT CTGTCCTTAA AACACATAAT GTTGATTCAG 161598 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GCTAGCAACT CAGAGGAACT CTGCGGTTTT CTGTCCTTAA AACACATAAT GTTGATTCAG 296 GACAGTGTTT TTACCGCCAA CCATCAAGAA GTTATTTGCA CCTGAAGATA AACAACTTCA 161658 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| GACAGTGTTT TTACCGCCAA CCATCAAGAA GTTATTTGCA CCTGATGATA AACAACTTCA 356 GTTACGACTG TACAGTATTG GGTTCAACTT TTTAAAGCAC GCAGTGAGTT TATCTTGGAT 161718 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTACGACTG TACAGTATTG GGTTCAACTT TTTAAAGCAC GCAGTGAGTT TATCTTGGAT 416 GTCGAGTATC AGTGATAGAT AAACACACGC TGTGAGTTTA TCTTGGAAGT TGAATATCAG 161778 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTCGAGTATC AGTGATAGAT AAACACACGC TGTGAGTTTA TCTTGGAAGT TGAATATCAG 476 TGATGGATAA ACACATGGAA CTGTCTTTAT AGATCGTTTT AGATTTTCTT GGAGGGATAG 161838 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGATGGATAA ACACATGGAA CTGTCTTTAT AGATCGTTTT AGATTTTCTT GGAGGGATAG 536 TCCCTGACGA TGTAACATGG AATAAACAAC GGGCAGGATG CCAACCATTA ATGGCGCCGA 161898 |||||||||| |||||||||| |||||||||| || |||||| |||||||||| |||||||||| TCCCTGACGA TGTAACATGG AATAAACAAC AGGTAGGATG CCAACCATTA ATGGCGCCGA 596 AAGTAGTACA TAACTGAAAC TGATTTGCAG GGTAGTTAGG AAATTGGAAT CCCAACCATT 161958 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AAGTAGTACA TAACTGAAAC TGATTTGCAG GGTAGTTAGG AAATTGGAAT CCCAACCATT 656 AAGGGAGTAT GGGTTTGAAA AACATGTGAA TCTGGTGTAC ATGCTACGGA AAGTTGTGCC 162018 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| AAGGGAGTAT GGGTTTGAAA AACATGTGAA TCTGGTGTAC ATGCTACTGA AAGTTGTGCC 716 CTCGTTGGCT CGTT 162032 |||||||||| |||| CTCGTTGGCT CGTT 730 hqPGS_chr+_32859895- (161120 161140,161234 161267,161359 162032)