Query EST sequence XX (FILE: 13149881-]) 1 cgayctccag gacatggtgg cccagtcgaa gmtgtttcag cgtgcgttcg accccctcga 61 cggctccagc attgtcgaca ccaacttcac cgtcggaacc atcttcggag tctggcccgg 121 cgacaagctg accggagtga ccggcggcga ccagggtsct gccgcgatgg gcatctacgg 181 ccctcgcacg acctacattg tcgccctcaa ggactgccct gggacgcacg agttcctcct 241 cctcgacgaa ggtaaatggc agcatgtgaa ggacaccacg accattgggg aagggaagat 301 gttctctcct ggtaatctga gggcgacatt cgataaccct gagtacgaca agctcatcaa 361 ctactacgtc aaggagaagt acacattgcg ctacactgga ggaatggttc ccgatgtcaa 421 ccagatcata gtgaaggaga agggcatctt caccaacgtg acgtccccga cggccaaggc 481 caagctgcgg ctctcttcga ggtggcgccc ctgggcttct tgatggagaa ggccggcggg 541 tacagcagcg acmgcaagca gtcggtgctg gacagggtga tcaacgagct cgacgagcgg 601 acccaggtgg cctatgggtc caagaacgag atcatccggt tcgaggagac cctctacggc 661 tcgtccaggc tcycccccag cgckkcckcc kcnmaccgcg cccttatctg aattactaga 721 atccgggctc gtagatgctg gagtacacaa wacayyyaaa wwacccacww tttatcaaca 781 actataagtt twtagawtaa acttttttaa acaatcagaa aagagaactg c Predicted gene structure (within BAC gi| 51315585 | segment 102759 to 104325): Exon 1 104325 104006 ( 320 n); EST 34 352 ( 319 n); score: 0.988 Intron 1 104005 103895 ( 111 n); Pd: 1.000 (s: 1.00), Pa: 0.817 (s: 1.00) Exon 2 103894 103823 ( 72 n); EST 353 424 ( 72 n); score: 1.000 Intron 2 103822 103165 ( 658 n); Pd: 0.998 (s: 1.00), Pa: 0.697 (s: 1.00) Exon 3 103164 102759 ( 406 n); EST 425 830 ( 406 n); score: 0.919 MATCH chr- 13149881- 0.954 798 0.960 C PGS_chr-_13149881- (104325 104006,103894 103823,103164 102759) Alignment: GTTTCAGCGT TGCGTTCGAC CCCCTCGACG GCTCCAGCAT TGTCGACACC AACTTCACCG 104266 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTTTCAGCG- TGCGTTCGAC CCCCTCGACG GCTCCAGCAT TGTCGACACC AACTTCACCG 92 TCGGAACCAT CTTCGGAGTC TGGCCCGGCG ACAAGCTGAC CGGAGTGACC GGCGGCGACC 104206 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TCGGAACCAT CTTCGGAGTC TGGCCCGGCG ACAAGCTGAC CGGAGTGACC GGCGGCGACC 152 AGGTCGCTGC CGCGATGGGC ATCTACGGCC CTCGCACGAC CTACATTGTC GCCCTCAAGG 104146 ||| |||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGGTSCTGC CGCGATGGGC ATCTACGGCC CTCGCACGAC CTACATTGTC GCCCTCAAGG 212 ACTGCCCTGG GACGCACGAG TTCCTCCTCC TCGACGAAGG TAAATGGCAG CATGTGAAGG 104086 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACTGCCCTGG GACGCACGAG TTCCTCCTCC TCGACGAAGG TAAATGGCAG CATGTGAAGG 272 ACACCACGAC CATTGGGGAA GGGAAGATGT TCTCTCCTGG TAATCTGAGG GCGACATTCG 104026 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACACCACGAC CATTGGGGAA GGGAAGATGT TCTCTCCTGG TAATCTGAGG GCGACATTCG 332 ATAACCCTGA GTACGACAAG GTACTCCGTT ACTGGCTCCT GTTACTGTCA GTATTTTTTT 103966 |||||||||| |||||||||| ATAACCCTGA GTACGACAAG .......... .......... .......... .......... 352 TTCTTCTTCT TAATATCTGC TACGGCTTTC TGTGCGCGCC TAATCGGTGC TACAAATATA 103906 .......... .......... .......... .......... .......... .......... 352 TGTATCTTCA GCTCATCAAC TACTACGTCA AGGAGAAGTA CACATTGCGC TACACTGGAG 103846 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... .CTCATCAAC TACTACGTCA AGGAGAAGTA CACATTGCGC TACACTGGAG 401 GAATGGTTCC CGATGTCAAC CAGGTACATA CGTATATATC ACAAAAACTT TAAATAATTC 103786 |||||||||| |||||||||| ||| GAATGGTTCC CGATGTCAAC CAG....... .......... .......... .......... 424 ACACCCTTAG GGCTTGTTCG GTTAGCTCTC AATCCATATG GATTGAGTGG GATTGGGTGG 103726 .......... .......... .......... .......... .......... .......... 424 GATTAAATCC CAAGCAAGTC AAAGTTCTTC TAAATTTTTT CCAATCCCAT TCAATCCATG 103666 .......... .......... .......... .......... .......... .......... 424 TATAATAGGA ATAACCGAAC AAACCCTTAG TAAACCACAC AGAAAAATCC CGACACCTCA 103606 .......... .......... .......... .......... .......... .......... 424 CAACCCGTAC GTTCACTCGA TCGGATCACT AGCTTAATTA GTAATCAGGA GTAGTACATG 103546 .......... .......... .......... .......... .......... .......... 424 TTCCAAAACC AAACAGATCC ATATATGATT AACCTGTCAT GTCAACTCTC TACACACCTT 103486 .......... .......... .......... .......... .......... .......... 424 GCACACCAAA ACAGCCAAAT TTTCAGAGAG GACGACGGCG CAAACTTTTG AGAAGAAAGA 103426 .......... .......... .......... .......... .......... .......... 424 ATTTGGTTTG ACGTTGCCAG TAAAATGTCT CGGGCTGTAG AGTCACTGCA AGCCCATGCT 103366 .......... .......... .......... .......... .......... .......... 424 AGTGAACATT GAGCTCTGTG TACCAGCGTC TGCTTTAAAG CAAGGCCACG CCAAGCAACA 103306 .......... .......... .......... .......... .......... .......... 424 CAGCAATTCC CTACAGTGAC CCCCCAACCT CGCTTTCGCT TTAGGTCTTT TCCTATGCCG 103246 .......... .......... .......... .......... .......... .......... 424 CTTTCAGTAC ACAGAACCTG CGTGAGCACC AGCATATATG CATGCATATG ATGCCTGTGA 103186 .......... .......... .......... .......... .......... .......... 424 GTATGGTCGA TGATGACGCA GATCATAGTG AAGGAGAAGG GCATCTTCAC CAACGTGACG 103126 ||||||||| |||||||||| |||||||||| |||||||||| .......... .......... .ATCATAGTG AAGGAGAAGG GCATCTTCAC CAACGTGACG 463 TCCCCGACGG CCAAGGCCAA GCTGCGGCTC CTCTTCGAGG TGGCGCCCCT GGGCTTCTTG 103066 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| TCCCCGACGG CCAAGGCCAA GCTGCGGCT- CTCTTCGAGG TGGCGCCCCT GGGCTTCTTG 522 ATGGAGAAGG CCGGCGGGTA CAGCAGCGAC GGCAAGCAGT CGGTGCTGGA CAGGGTGATC 103006 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| ATGGAGAAGG CCGGCGGGTA CAGCAGCGAC MGCAAGCAGT CGGTGCTGGA CAGGGTGATC 582 AACGAGCTCG ACGAGCGGAC CCAGGTGGCC TATGGGTCCA AGAACGAGAT CATCCGGTTC 102946 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AACGAGCTCG ACGAGCGGAC CCAGGTGGCC TATGGGTCCA AGAACGAGAT CATCCGGTTC 642 GAGGAGACCC TCTACGGCTC GTCCAGGCTC GCCGCCAGCG CCACCGCCAC CGCCCGCGCC 102886 |||||||||| |||||||||| |||||||||| || |||||| | || || | ||||||| GAGGAGACCC TCTACGGCTC GTCCAGGCTC YCCCCCAGCG CKKCCKCCKC NMACCGCGCC 702 CTTATCTGAA TTACTAGAAT CCGGGCTCGT AGATGCTGGA GTACACAGTA CAGGGAAATT 102826 |||||||||| |||||||||| |||||||||| |||||||||| ||||||| | || ||| CTTATCTGAA TTACTAGAAT CCGGGCTCGT AGATGCTGGA GTACACAAWA CAYYYAAAWW 762 GCCCACTTTT T-TCATCAAC T-TAAGTTTT TAGATTAAAC TTTTTTGAAA CAATCAGACA 102768 ||||| || | ||| |||| | ||||||| |||| ||||| |||||| ||| |||||||| | ACCCACWWTT TATCAACAAC TATAAGTTTW TAGAWTAAAC TTTTTT-AAA CAATCAGAAA 821 GGAGATCTG 102759 |||| ||| AGAGAACTG 830 hqPGS_chr-_13149881- (104325 104006,103894 103823,103164 102759)