Query EST sequence XX (FILE: 67016853+]) 1 CCACTTTCAT ATCATACTGA TGCTGGTTTG TGACAACAAT CCATGGGGAT TGGTTGTTCA 61 CGGGATGAAA ATTTGAATAA GGATTAAGGT GTGGTACCGT GAGTCAAGCG TTTGAACGTA 121 CTAAGCACAT GCCGAGAAAT ATGGTAAATC GGTAAGCCTA GTACCTGAGT GAACCTGCCC 181 GCAGATTGCC CTCCTCACGC GACCTGAGAC GAGGTCTCCC ATTCCGGTTA TGGTGGGTAC 241 AAGTGCGGTC ACTGCACGAC GGCCAGTCGG GGTCAGTGAG GCATTGTACG CCAAGGCGGT 301 GAGCCCCTTT CTGTTGCCAG GGAATCGATG GGGACGGTTG ATATGTGTGG GGCCGGAGTG 361 CCCCTACATG TCGTGTGTTT AGGTTTACCT TGCAAGGTTT AAAAACTCGA TTCGAATCGT 421 CTGCTTCTCG CAGCTAATGA GACTGCTTGA TCCATGCTGC TACATTGAGT AATAAGTGGA 481 AATGAGGTGA CTGGCAAAAG ATGTTGTTTG ATAAAAATGT TTGATACCAT GTATGATTAT 541 CTAGGTACAC ATCTAGTTTA AAAGGATCAT ACTAAAACTT GAAAAGCTAA AACTTGATTT 601 TAGACTCAGC TAGTGCTTTT GGCAAACCAA ACCCCTCAGC CAAACAACTG CATGTCTAGA 661 GGTAGAGGAG TAGACTCCTC ACACCGGGTA AGTCTAGCTG AGTATTAGTA TACTCAGCCT 721 TGCTTGTGGC ACCATTTTTG CAAGTACCTC CTTACTTTAG TTGATGGTGT GACTGGGCCT 781 TCATCCCTGC CACCGGGATA AATGGTCGAG AAGGTTA Predicted gene structure (within BAC gi| 51315585 | segment 84399 to 86467): Exon 1 84399 84472 ( 74 n); EST 1 74 ( 74 n); score: 0.800 Intron 1 84473 85732 ( 1260 n); Pd: 0.000 (s: 0.00), Pa: 0.000 (s: 0.85) Exon 2 85733 86467 ( 735 n); EST 75 814 ( 740 n); score: 0.805 MATCH chr+ 67016853+ 0.805 809 0.990 C PGS_chr+_67016853+ (84399 84472,85733 86467) Alignment: CCCCTAATGA TGTGATAATG GGCAACCAAA AATTGGCTAA GTTCATAATG AGATAAACCA 84458 || || || | | | | || CCACTTTCAT ATCATACTGA TGCTGGTTTG TGACAACAAT CCATGGGGAT TGGTTGTTCA 60 CCAGAGAAAA ATGCAAACTC ATGAAAAGGA AGCAAACTCT TACCTATTGC TAATAATTTG 84518 | || ||| || CGGGATGAAA ATTT...... .......... .......... .......... .......... 74 AGAGAAAGGC CACTTAATTC AAATAATACA TACCACCCCT TCCCTTAAGC AAAAAGATGC 84578 .......... .......... .......... .......... .......... .......... 74 CAAACTTCAG AATGATTGCT CTTGCGCAAA ACAATAACTA AGAAAAATAA GAACTTTGTT 84638 .......... .......... .......... .......... .......... .......... 74 GTTTGATATT TTTCAATTAT AGTGGTAGTA GAAAGCACCT ATTTGGCTAG AAACTTGAGA 84698 .......... .......... .......... .......... .......... .......... 74 AAATCATAGA AGAATAATTA AAAGGTATTA ATGACTAGGA ATTTGTGTCA AGTCATGTTA 84758 .......... .......... .......... .......... .......... .......... 74 TAACACCTAA AAGCCAGTAA AAATGAGTTT TGGAGAATTA CCCACTGTTA AATAATAGTT 84818 .......... .......... .......... .......... .......... .......... 74 GTAGTTCAAA GCACCCCTTC TGCCCTAGAA TTTAACAATT TTGTCCAGAG AAAACTGTTC 84878 .......... .......... .......... .......... .......... .......... 74 ACTTTCTAAT CCCCAAATTT TGAGACAGAG AAACATACAT CAGTACCAAG CCACTGTAAT 84938 .......... .......... .......... .......... .......... .......... 74 TTTTGCAGAA TTTTTAGAAT TTTATAAAAG CAACTTGTAG TTCAAACCTA CTCCAAAACA 84998 .......... .......... .......... .......... .......... .......... 74 TTTAAGAGAA TAAAAGAAAA GGAAAGAAGA AATAAACCTC ACCCCAATAA GTCTAACTTG 85058 .......... .......... .......... .......... .......... .......... 74 AGTACTTATC AACTCTCACT AAGACTTAAA AGGAATTCAG TGGAACCCCA AAAATAAACC 85118 .......... .......... .......... .......... .......... .......... 74 TACCACTTAC CTTAGATAAA GTTTGAACCA ATTTACCAAG TATACCACCC AAGGGTCTTA 85178 .......... .......... .......... .......... .......... .......... 74 CACAAGTAAA GTTAACCTTG TTTAACTCCA ATAGATCATA CATCGTCAAA AGTTGTAATT 85238 .......... .......... .......... .......... .......... .......... 74 TCTAAAGCAC CTATCATATC ATGCATATAT CTTACGCATT GCATTCATTA GATTGTAATC 85298 .......... .......... .......... .......... .......... .......... 74 TTGCCGATGG AGAGTACGTG CTCATTCCCG AGCAAGGACC TGTCCAAGAG GAGGACCAGG 85358 .......... .......... .......... .......... .......... .......... 74 AGCAGGCTTC AGAGGCTGCT ATTGAGGATC TCCCCGCAGC CCCAGCAATT GAAGGCAAGC 85418 .......... .......... .......... .......... .......... .......... 74 CCCAGTTTTA TGCATAACCG TATTATTATA TGCTACTTTA CTACACTTAA TGCTTGTAGG 85478 .......... .......... .......... .......... .......... .......... 74 ATTGTAATGT GCACTTAAGT GTAGGAGTTG CTTGAAACCT CTAGTTGCAT GAACTTAGGA 85538 .......... .......... .......... .......... .......... .......... 74 TTCCTTTTTG AGATGAATAC TAGTATGCTA GGTCGAGTAG CTGCTTGCTA ATCAGAATCT 85598 .......... .......... .......... .......... .......... .......... 74 CGGTAGAAGT CGAGTGATTT TTCTAGCACT CGCGCGAGGT CAGGAATTGA TTGTATTCAT 85658 .......... .......... .......... .......... .......... .......... 74 CTTGATAACG GGATATATGT TAGTCTATGG ACTTGGATCC AGGGAGGATG CCTTGTCCAT 85718 .......... .......... .......... .......... .......... .......... 74 GAGACGGGAA AAAGAATTAA GGATTAATGT GTGGATACC- TGAGTCAAGC TTTTGAACGT 85777 | ||| ||||||| || |||| |||| |||||||||| ||||||||| .......... ....GAATAA GGATTAAGGT GTGG-TACCG TGAGTCAAGC GTTTGAACGT 119 ACTAAACACA TGCCGAGAAA AATGGTAAC- CGGTAAACCT AGTACCTGAT TGAAGCCGGG 85836 ||||| |||| |||||||||| ||||||| |||||| ||| ||||||||| |||| | | ACTAAGCACA TGCCGAGAAA TATGGTAAAT CGGTAAGCCT AGTACCTGAG TGAACCTGCC 179 CGCGGACTTT ATCCCTCATG CGATCTGAGA CTGGGTCTCC CATGCTAGCT ATGGTGGGTA 85896 ||| || | ||||| | ||| |||||| | ||||||| ||| | | | |||||||||| CGCAGATTGC CCTCCTCACG CGACCTGAGA CGAGGTCTCC CATTCCGGTT ATGGTGGGTA 239 CAAGTGCGGT CACTGCATGG CGG-CAGCCG GGGTCAGTGG AGCATTGTAT GCCAAGACGG 85955 |||||||||| ||||||| | ||| ||| || ||||||||| |||||||| |||||| ||| CAAGTGCGGT CACTGCACGA CGGCCAGTCG GGGTCAGTGA GGCATTGTAC GCCAAGGCGG 299 TGAG-GCCTG GACGCGAACG GGGAATCGAT GGGGACGGTT GTCATGTGTG GGGTCGGAGT 86014 |||| ||| | | |||||||||| |||||||||| | ||||||| ||| |||||| TGAGCCCCTT TCTGTTGCCA GGGAATCGAT GGGGACGGTT GATATGTGTG GGGCCGGAGT 359 ACCCTGACAT GCCGTGTGTT TAGGTTTACC TTGCAAGG-T T-AAAACTCG ATTCGAATCG 86072 ||| |||| | |||||||| |||||||||| |||||||| | | |||||||| |||||||||| GCCCCTACAT GTCGTGTGTT TAGGTTTACC TTGCAAGGTT TAAAAACTCG ATTCGAATCG 419 TCTGCTTCTC GCAGGTAATG AGACTGCTTG ACCCCTTATA CTGCATCGAG TAAGAAGT-G 86131 |||||||||| |||| ||||| |||||||||| | || | | || ||| ||| ||| |||| | TCTGCTTCTC GCAGCTAATG AGACTGCTTG ATCCATGCTG CTACATTGAG TAATAAGTGG 479 AAATGAGGTT ACATGAGATA ACTTGTGGAT TGAACTAAAT GTTTGTTACC ATGTATGCTT 86191 ||||||||| || || | | | ||| | | ||| |||| ||||| |||| ||||||| || AAATGAGGTG AC-TGGCAAA AGATGTTGTT TGATAAAAAT GTTTGATACC ATGTATGATT 538 A-GAAGGAAC AAATCTAG-C TAAGTTAATG ATGATAGAAT TTGAAAAGCT AAAATTTGCT 86249 | ||| || | |||||| ||| || || || || |||||||||| |||| ||| | ATCTAGGTAC ACATCTAGTT TAAAAGGATC ATACTAAAAC TTGAAAAGCT AAAACTTGAT 598 TTTAGAAACA GCTAGTGCTT TTGGCAAACC AAACCCCTCA GCCAAACAGC TGCATAGTCT 86309 |||||| || |||||||||| |||||||||| |||||||||| |||||||| | ||||| |||| TTTAGACTCA GCTAGTGCTT TTGGCAAACC AAACCCCTCA GCCAAACAAC TGCAT-GTCT 657 AGAGGTAGAG GAGTAGACTC CTCACACCGG TTAAGTCTAG CTGAGTATTA GTATACTCAG 86369 |||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| AGAGGTAGAG GAGTAGACTC CTCACACCGG GTAAGTCTAG CTGAGTATTA GTATACTCAG 717 CCTTGCTTGT GGCACAATTT TTGCAGGTAC CATTCAGGAA ATGGTTGATG GTGTGACTTG 86429 |||||||||| ||||| |||| ||||| |||| | | | | ||||||| |||||||| | CCTTGCTTGT GGCACCATTT TTGCAAGTAC C-TCCTTACT TTAGTTGATG GTGTGACTGG 776 ACCTACCACC CTGCCATCGG GTTGGACGGT TGAGTGGG 86467 ||| | || |||||| ||| | | | ||| ||| || GCCTTCATCC CTGCCACCGG GATAAATGGT CGAGAAGG 814 hqPGS_chr+_67016853+ (84399 84472,85733 86467)