Query EST sequence	XX (FILE: 13149881-])

         1  cgayctccag gacatggtgg cccagtcgaa gmtgtttcag cgtgcgttcg accccctcga
        61  cggctccagc attgtcgaca ccaacttcac cgtcggaacc atcttcggag tctggcccgg
       121  cgacaagctg accggagtga ccggcggcga ccagggtsct gccgcgatgg gcatctacgg
       181  ccctcgcacg acctacattg tcgccctcaa ggactgccct gggacgcacg agttcctcct
       241  cctcgacgaa ggtaaatggc agcatgtgaa ggacaccacg accattgggg aagggaagat
       301  gttctctcct ggtaatctga gggcgacatt cgataaccct gagtacgaca agctcatcaa
       361  ctactacgtc aaggagaagt acacattgcg ctacactgga ggaatggttc ccgatgtcaa
       421  ccagatcata gtgaaggaga agggcatctt caccaacgtg acgtccccga cggccaaggc
       481  caagctgcgg ctctcttcga ggtggcgccc ctgggcttct tgatggagaa ggccggcggg
       541  tacagcagcg acmgcaagca gtcggtgctg gacagggtga tcaacgagct cgacgagcgg
       601  acccaggtgg cctatgggtc caagaacgag atcatccggt tcgaggagac cctctacggc
       661  tcgtccaggc tcycccccag cgckkcckcc kcnmaccgcg cccttatctg aattactaga
       721  atccgggctc gtagatgctg gagtacacaa wacayyyaaa wwacccacww tttatcaaca
       781  actataagtt twtagawtaa acttttttaa acaatcagaa aagagaactg c         

Predicted gene structure (within BAC gi| 51315585 | segment 102759 to 104325):

 Exon  1      104325      104006 ( 320 n);        EST          34         352 ( 319 n); score:  0.988
  Intron  1      104005      103895 ( 111 n); Pd:  1.000 (s:  1.00), Pa:  0.817 (s:  1.00)
 Exon  2      103894      103823 (  72 n);        EST         353         424 (  72 n); score:  1.000
  Intron  2      103822      103165 ( 658 n); Pd:  0.998 (s:  1.00), Pa:  0.697 (s:  1.00)
 Exon  3      103164      102759 ( 406 n);        EST         425         830 ( 406 n); score:  0.919

MATCH   chr- 13149881-        0.954   798  0.960  C
PGS_chr-_13149881-     (104325  104006,103894  103823,103164  102759)

Alignment:

GTTTCAGCGT TGCGTTCGAC CCCCTCGACG GCTCCAGCAT TGTCGACACC AACTTCACCG          104266
|||||||||  |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GTTTCAGCG- TGCGTTCGAC CCCCTCGACG GCTCCAGCAT TGTCGACACC AACTTCACCG              92

TCGGAACCAT CTTCGGAGTC TGGCCCGGCG ACAAGCTGAC CGGAGTGACC GGCGGCGACC          104206
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TCGGAACCAT CTTCGGAGTC TGGCCCGGCG ACAAGCTGAC CGGAGTGACC GGCGGCGACC             152

AGGTCGCTGC CGCGATGGGC ATCTACGGCC CTCGCACGAC CTACATTGTC GCCCTCAAGG          104146
|||   |||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
AGGGTSCTGC CGCGATGGGC ATCTACGGCC CTCGCACGAC CTACATTGTC GCCCTCAAGG             212

ACTGCCCTGG GACGCACGAG TTCCTCCTCC TCGACGAAGG TAAATGGCAG CATGTGAAGG          104086
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ACTGCCCTGG GACGCACGAG TTCCTCCTCC TCGACGAAGG TAAATGGCAG CATGTGAAGG             272

ACACCACGAC CATTGGGGAA GGGAAGATGT TCTCTCCTGG TAATCTGAGG GCGACATTCG          104026
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ACACCACGAC CATTGGGGAA GGGAAGATGT TCTCTCCTGG TAATCTGAGG GCGACATTCG             332

ATAACCCTGA GTACGACAAG GTACTCCGTT ACTGGCTCCT GTTACTGTCA GTATTTTTTT          103966
|||||||||| ||||||||||                                            
ATAACCCTGA GTACGACAAG .......... .......... .......... ..........             352

TTCTTCTTCT TAATATCTGC TACGGCTTTC TGTGCGCGCC TAATCGGTGC TACAAATATA          103906
                                                                 
.......... .......... .......... .......... .......... ..........             352

TGTATCTTCA GCTCATCAAC TACTACGTCA AGGAGAAGTA CACATTGCGC TACACTGGAG          103846
            ||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
.......... .CTCATCAAC TACTACGTCA AGGAGAAGTA CACATTGCGC TACACTGGAG             401

GAATGGTTCC CGATGTCAAC CAGGTACATA CGTATATATC ACAAAAACTT TAAATAATTC          103786
|||||||||| |||||||||| |||                                        
GAATGGTTCC CGATGTCAAC CAG....... .......... .......... ..........             424

ACACCCTTAG GGCTTGTTCG GTTAGCTCTC AATCCATATG GATTGAGTGG GATTGGGTGG          103726
                                                                 
.......... .......... .......... .......... .......... ..........             424

GATTAAATCC CAAGCAAGTC AAAGTTCTTC TAAATTTTTT CCAATCCCAT TCAATCCATG          103666
                                                                 
.......... .......... .......... .......... .......... ..........             424

TATAATAGGA ATAACCGAAC AAACCCTTAG TAAACCACAC AGAAAAATCC CGACACCTCA          103606
                                                                 
.......... .......... .......... .......... .......... ..........             424

CAACCCGTAC GTTCACTCGA TCGGATCACT AGCTTAATTA GTAATCAGGA GTAGTACATG          103546
                                                                 
.......... .......... .......... .......... .......... ..........             424

TTCCAAAACC AAACAGATCC ATATATGATT AACCTGTCAT GTCAACTCTC TACACACCTT          103486
                                                                 
.......... .......... .......... .......... .......... ..........             424

GCACACCAAA ACAGCCAAAT TTTCAGAGAG GACGACGGCG CAAACTTTTG AGAAGAAAGA          103426
                                                                 
.......... .......... .......... .......... .......... ..........             424

ATTTGGTTTG ACGTTGCCAG TAAAATGTCT CGGGCTGTAG AGTCACTGCA AGCCCATGCT          103366
                                                                 
.......... .......... .......... .......... .......... ..........             424

AGTGAACATT GAGCTCTGTG TACCAGCGTC TGCTTTAAAG CAAGGCCACG CCAAGCAACA          103306
                                                                 
.......... .......... .......... .......... .......... ..........             424

CAGCAATTCC CTACAGTGAC CCCCCAACCT CGCTTTCGCT TTAGGTCTTT TCCTATGCCG          103246
                                                                 
.......... .......... .......... .......... .......... ..........             424

CTTTCAGTAC ACAGAACCTG CGTGAGCACC AGCATATATG CATGCATATG ATGCCTGTGA          103186
                                                                 
.......... .......... .......... .......... .......... ..........             424

GTATGGTCGA TGATGACGCA GATCATAGTG AAGGAGAAGG GCATCTTCAC CAACGTGACG          103126
                       ||||||||| |||||||||| |||||||||| ||||||||||
.......... .......... .ATCATAGTG AAGGAGAAGG GCATCTTCAC CAACGTGACG             463

TCCCCGACGG CCAAGGCCAA GCTGCGGCTC CTCTTCGAGG TGGCGCCCCT GGGCTTCTTG          103066
|||||||||| |||||||||| |||||||||  |||||||||| |||||||||| ||||||||||
TCCCCGACGG CCAAGGCCAA GCTGCGGCT- CTCTTCGAGG TGGCGCCCCT GGGCTTCTTG             522

ATGGAGAAGG CCGGCGGGTA CAGCAGCGAC GGCAAGCAGT CGGTGCTGGA CAGGGTGATC          103006
|||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| ||||||||||
ATGGAGAAGG CCGGCGGGTA CAGCAGCGAC MGCAAGCAGT CGGTGCTGGA CAGGGTGATC             582

AACGAGCTCG ACGAGCGGAC CCAGGTGGCC TATGGGTCCA AGAACGAGAT CATCCGGTTC          102946
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
AACGAGCTCG ACGAGCGGAC CCAGGTGGCC TATGGGTCCA AGAACGAGAT CATCCGGTTC             642

GAGGAGACCC TCTACGGCTC GTCCAGGCTC GCCGCCAGCG CCACCGCCAC CGCCCGCGCC          102886
|||||||||| |||||||||| ||||||||||  || |||||| |  || || |    |||||||
GAGGAGACCC TCTACGGCTC GTCCAGGCTC YCCCCCAGCG CKKCCKCCKC NMACCGCGCC             702

CTTATCTGAA TTACTAGAAT CCGGGCTCGT AGATGCTGGA GTACACAGTA CAGGGAAATT          102826
|||||||||| |||||||||| |||||||||| |||||||||| |||||||  | ||   |||  
CTTATCTGAA TTACTAGAAT CCGGGCTCGT AGATGCTGGA GTACACAAWA CAYYYAAAWW             762

GCCCACTTTT T-TCATCAAC T-TAAGTTTT TAGATTAAAC TTTTTTGAAA CAATCAGACA          102768
 |||||  || | ||| |||| | |||||||  |||| ||||| |||||| ||| |||||||| |
ACCCACWWTT TATCAACAAC TATAAGTTTW TAGAWTAAAC TTTTTT-AAA CAATCAGAAA             821

GGAGATCTG                                                                  102759
 |||| |||                                                        
AGAGAACTG                                                                     830


hqPGS_chr-_13149881-     (104325  104006,103894  103823,103164  102759)