Query EST sequence XX (FILE: 24764857-]) 1 tgtgagaatc tactggtgaa catgagggat ccgcagcgac caatctgcaa gatcggtgat 61 cttggactgt caaaggttaa acagcatact ttggtatctg gtggtgttag aggaacctta 121 ccatggatgg caccagagct tctgagtggg aaaagtaata tggtgtcaga caagattgat 181 gtctattcgt ttggaattgt catgtgggag ttgcttactg gggaagagcc atactctggc 241 atgcgtgctg ctgaaattat tgggggcatt gtaaacgatt ccctacgtcc tcaaattcct 301 tcgtggtgtg atcctgagtg gaaggggttg atggaaagct gttggtccag tgatccagct 361 gagagaccgt ccttcacgga tatatctcaa aggttgagga aaatggccgc cgcaatgaat 421 gtgaagtaaa ggtccggaag ccatatttgt cttgtatgtg tgttccccac atccaatata 481 tatatagcga tatacaagag gaaggcagag ttcaaacagg attattttga gtaaatatgt 541 ccatatgtct tggcagcatc gcagttgatg accctactcc aagtgataat ttatcaagtg 601 ctgacttcat gggagaaaat ctatgtcatg gagattccaa agcatgtttg atgtgagtct 661 gccgttcggt gtgtgtttaa aaaaaggggg ggcccggtac cca Predicted gene structure (within BAC gi| 51315585 | segment 5700 to 8493): Exon 1 5700 5756 ( 57 n); EST 98 150 ( 53 n); score: 0.632 Intron 1 5757 5874 ( 118 n); Pd: 0.000 (s: 0.62), Pa: 0.988 (s: 0.00) Exon 2 5875 5883 ( 9 n); EST 151 158 ( 8 n); score: 0.556 Intron 2 5884 6185 ( 302 n); Pd: 0.900 (s: 0.00), Pa: 0.593 (s: 0.00) Exon 3 6186 6203 ( 18 n); EST 159 174 ( 16 n); score: 0.667 Intron 3 6204 7297 ( 1094 n); Pd: 0.000 (s: 0.00), Pa: 0.934 (s: 0.98) Exon 4 7298 7385 ( 88 n); EST 175 262 ( 88 n); score: 0.977 Intron 4 7386 8088 ( 703 n); Pd: 0.966 (s: 0.96), Pa: 0.862 (s: 0.98) Exon 5 8089 8493 ( 405 n); EST 263 670 ( 408 n); score: 0.965 MATCH chr+ 24764857- 0.933 577 0.821 C PGS_chr+_24764857- (5700 5756,5875 5883,6186 6203,7298 7385,8089 8493) Alignment: CTGGCAGTGC TTGGGGAGAA GACAACATTG ATGTCTCCAG ATGTTCTTGT AGCCGTGGTG 5759 |||| ||| | | ||| | | ||| | ||| | |||| | ||| || || | | CTGGTGGTGT TAGAGGA-AC CTTACCATGG ATGGCACCAG AGCTTC-TG- AG-TGGG... 150 TGCCCTACTG TAGGTACAAG CTCTGAAATG GCTAGAGTTT CCATTGGGTC AAATGTTCAT 5819 .......... .......... .......... .......... .......... .......... 150 GATATTTTCA GACATCAGAT CTTATGATTT TTTTTGCTGA TATGTACTGT TTCAGGTTAG 5879 || .......... .......... .......... .......... .......... .....AAAAG 155 TACAGTATCC TGGAGAGTTT GTGGTGACAT TCCCAAGGGC ATACCACATT GGGTTTAGTC 5939 || | TA-A...... .......... .......... .......... .......... .......... 158 ATGGTTAGTT ATGCCATTGA ACTAATGATG CCTTTTTGGC ACAGCTTTAT TGAATTGATT 5999 .......... .......... .......... .......... .......... .......... 158 GTGATGTGCT ATTTGTTAAC TATGTTTATT CCAGCTTTGC TAGATTTTCA CCTTCATGGT 6059 .......... .......... .......... .......... .......... .......... 158 ATGAGCAGTA TAAACAAAAT AATAATGGTT TCATGGACAA TCCTTAAATG GATCAGTGCT 6119 .......... .......... .......... .......... .......... .......... 158 CCCCTCATCA GTTATATAAC AAACTGAGGG TGCTCGAGAT ATCTCTACTA CTCTATATGT 6179 .......... .......... .......... .......... .......... .......... 158 TCTTAGTGTA GGCGTCCACA CAGGGTCTGT TCTGCCCGCC GCGAGCACGC CGCGATTTCT 6239 | | || || || | || | ......TAT- GGTGT-CAGA CAAG...... .......... .......... .......... 174 CCACGCGCAG CCCTCGCAAT CCGCCGCCTT TCCATCCGCG GCCAATCCGC CGCGCCAAAT 6299 .......... .......... .......... .......... .......... .......... 174 CCGCCGCCAC ACTCCCTGCG CCCGCAACGC CCGCCCGCCG CGATTTCTCC ACCCGCAGCC 6359 .......... .......... .......... .......... .......... .......... 174 CCCCGCAATC CGCCGCCTTT CCATCCGCGG CCGCAATCGT TTCCATCCGC GGCTGCAATC 6419 .......... .......... .......... .......... .......... .......... 174 CACCGCGCCA AATCCGCCGC CACACCCCTG CGCCCGCAAC GCCCACCACT GCGCCGCCCT 6479 .......... .......... .......... .......... .......... .......... 174 TCCATCCACG CGCAGCATGC CGCGATCCAC AACTGTTGTG CCATCCTCGC CTCGCATGCC 6539 .......... .......... .......... .......... .......... .......... 174 ACGCCATCCC CCCGATCGTC GGTGTCGCCC AAAAACCGCG CGGCCCTTCC ATCCACGCGC 6599 .......... .......... .......... .......... .......... .......... 174 ATCCGTCGTC GGCAAAGTCT GGGCCACCGT GGTCAAGCTT GCTGATGTCG CCATCCTGTA 6659 .......... .......... .......... .......... .......... .......... 174 GCACTTCACC GCGGGGTGGT CTTTGTGACG AATCGTCGTC AAGCTAGATC TGCAGCGGTC 6719 .......... .......... .......... .......... .......... .......... 174 AGGGGCGGAT TTGGGACTAA CGAGCCACTG CTCCCGATGG CGGCATTCGC AGCCCCTTCC 6779 .......... .......... .......... .......... .......... .......... 174 TTGTCCTCGC GCATCCTCCT CGCCTCGCCC CACTCCCCGC CCACTCTCCT CCGCCTGCGC 6839 .......... .......... .......... .......... .......... .......... 174 CGCGCGGGCG GCCGCTCTCT GGAGCTGTCG TCACGGCGCG GCGGGAGCGC GCGCCTTCGG 6899 .......... .......... .......... .......... .......... .......... 174 GTCGTTCGAC GAGCGGTGAC GGAGGAGGAT AGCGGGACCG CGCGCGGAGA CGAGGAGGTG 6959 .......... .......... .......... .......... .......... .......... 174 GAGGAGGCCC CGGAGGAACC AGTGGCTGGC CGCGACCTCA TCACGCTCGC CGCCTGCCTC 7019 .......... .......... .......... .......... .......... .......... 174 GTGGGCCTCC TCACCGGCGT CTCCATCGTG CTCTTCAACC TCTCGGTAGG TAGCCACCTA 7079 .......... .......... .......... .......... .......... .......... 174 GCGAGCTCGG TTTCATGTTT TCATCCCCGG TGCCAAACGG AGGCCGTAGT ACGTTTGAAC 7139 .......... .......... .......... .......... .......... .......... 174 TTCAGAGGCG AATTGGTTGA AGGCAACTGA ACAGCGGGTT TGGTCTTAAT TTTGACATTC 7199 .......... .......... .......... .......... .......... .......... 174 AGCACTGCTT TGTCTTGTAA GTACATTTAA TAAACCATAT TAAACAATGA TCCACTTTTT 7259 .......... .......... .......... .......... .......... .......... 174 TGTATTCTGA CAAAAAACTA TTTCTATGTA TCTTGTAGAT TGATGTCTAT TCGTTTGGAA 7319 || |||||||||| |||||||||| .......... .......... .......... ........AT TGATGTCTAT TCGTTTGGAA 196 TTGTCATGTG GGAGTTGCTT ACTAGGGAAG AGCCATACTC TGGTATGCGT GCTGCTGAAA 7379 |||||||||| |||||||||| ||| |||||| |||||||||| ||| |||||| |||||||||| TTGTCATGTG GGAGTTGCTT ACTGGGGAAG AGCCATACTC TGGCATGCGT GCTGCTGAAA 256 TTATTGGTAA TGTCCAAAGT TCCCTATATG TACAATTCTA TGCCTTGATC TGTTATGACA 7439 |||||| TTATTG.... .......... .......... .......... .......... .......... 262 CTTTCCACCA TGTTCTGACC TTACCTTTTG ATATATCTTA GTTAGAATAA GTTGTGGACT 7499 .......... .......... .......... .......... .......... .......... 262 TAAGAACTGT GAACAGAGAA AGTTTATCTT CTAGAATTTA CTTGTTTGGA TTTGGATGCA 7559 .......... .......... .......... .......... .......... .......... 262 GCTTTGAAAG AACAAATAAG GCTGAGCTAA TAGAAAAGAA GGTTGTATGT TTAGTGGACA 7619 .......... .......... .......... .......... .......... .......... 262 TATAAATGGG TCAGTTGTAA ATCCCCAAAT ATCTTGAGTA ATGAAGGTGG GACATATAAT 7679 .......... .......... .......... .......... .......... .......... 262 TAAATAGCGG ACTTCAATAC AAAACCAGAT TATGTAGTTG GCGCCGTAGC TTGAATCGGA 7739 .......... .......... .......... .......... .......... .......... 262 TTATTTGCAG CTGCAATAAT GATGAAGGTT GAAGGATATA ACAATCTAGG TGTATGGTGT 7799 .......... .......... .......... .......... .......... .......... 262 AATTATGTGA TTGCACTTGC AGAATGTTTT TCTTTTTTGG ATTTTCCTTT GATAGCATGA 7859 .......... .......... .......... .......... .......... .......... 262 CTTTTTCTCC CTTTGCATAG TAACATTGGA CAAACCAATG ACAAATTGGT AGATGTGGAT 7919 .......... .......... .......... .......... .......... .......... 262 TTGCCCGACA TTGTGATGCA CTGCTGCATC ATATTCAATA ACAGATGTAC TACAGTATAC 7979 .......... .......... .......... .......... .......... .......... 262 AGATAGGGGA TTTATGTTGA TTTTTGAATC TTTAGTCATA AATATATCTC GCCTAGGCTT 8039 .......... .......... .......... .......... .......... .......... 262 GTTGTTATTA TGTCACAGCA GTGATCTGAT TACAATGCCT TTTTTCTAGG GGGCATTGTA 8099 | |||||||||| .......... .......... .......... .......... .........G GGGCATTGTA 273 AACGATTCCC TACGTCCTCA AATTCCTTCA TGGTGTGATC CTGAGTGGAA GGGGTTGATG 8159 |||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||||||||| AACGATTCCC TACGTCCTCA AATTCCTTCG TGGTGTGATC CTGAGTGGAA GGGGTTGATG 333 GAAAGCTGTT GGTCCAGTGA TCCAGCTGAG AGACCGTCCT TCACGGATAT ATCTCAAAGG 8219 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GAAAGCTGTT GGTCCAGTGA TCCAGCTGAG AGACCGTCCT TCACGGATAT ATCTCAAAGG 393 TTGAGGAAAA TGGCCGCCGC AATGAATGTG AAGTAAAGGT CCGGAAGCCA TATTTGTCTT 8279 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TTGAGGAAAA TGGCCGCCGC AATGAATGTG AAGTAAAGGT CCGGAAGCCA TATTTGTCTT 453 GTATGTG--T TCCCCACATC C-A-ATATAT ATAGCGATAT ACAAGACGAA GGCAGAGTTC 8335 ||||||| | |||||||||| | | |||||| |||||||||| |||||| ||| |||||||||| GTATGTGTGT TCCCCACATC CAATATATAT ATAGCGATAT ACAAGAGGAA GGCAGAGTTC 513 AAACAGGATT ATTTTGAGTA AATATGTTCC ATATGTCTTG GCAGCATCGC AGTTGATGAC 8395 |||||||||| |||||||||| |||||| ||| |||||||||| |||||||||| |||||||||| AAACAGGATT ATTTTGAGTA AATATG-TCC ATATGTCTTG GCAGCATCGC AGTTGATGAC 572 CCTACTCCAA GTGATAATTT ATCAAGTGCT GACTTCATGG GAGAACATCT ATGTCATGGA 8455 |||||||||| |||||||||| |||||||||| |||||||||| ||||| |||| |||||||||| CCTACTCCAA GTGATAATTT ATCAAGTGCT GACTTCATGG GAGAAAATCT ATGTCATGGA 632 GATTCCAAAG CATGTTTGAT GTGAGTCTGC CGTTCGGT 8493 |||||||||| |||||||||| |||||||||| |||||||| GATTCCAAAG CATGTTTGAT GTGAGTCTGC CGTTCGGT 670 hqPGS_chr+_24764857- (7298 7385,8089 8493)