Query EST sequence XX (FILE: 13149361-]) 1 gctccgagga ytccccgagc tccaggacat gggtggccca gtcgaaggtg gtttcagcgt 61 tgcgttcgac cccctcgacg gctccagcat tgtcgacacc aacttcaccg tcggaaccat 121 cttcggagtc tggcccggcg acaagctgac cggagtgacc ggcggcgacc agggtgctgc 181 cgcgatgggc atctacggcc ctcgcacgac ctacattgtc gccctcaagg actgccctgg 241 gacgcacgag ttcctcctcc tcgacgaagg taaatggcag catgtgaagg acaccacgac 301 cattggggaa gggaagatgt tctctcctgg taatctgagg gcgacattcg ataaccctga 361 gtacgacaag ctcatcaact actacgtcaa ggagaagtac acattgcgct acactggagg 421 aatggttccc gatgtcaacc agatcatagt gaaggagaag ggcatcttca ccaacgtgac 481 gtccccgacg gccaaggcca agctgcggct ctcttcgagg tggcgcccct gggcttcttg 541 atggagaagg ccggcgggta cagcagcgac ggcaygcagt cggtgctgga cagggtgatc 601 aacgagctcg acgagcggac ccaggtggcc tatgggtcca agaacgagyt catccggttc 661 gaggagaccc tctacggctc gtccaggctc gccgccagcg ccaccgccac sgsccgcgcc 721 cttatstgaa ttactagaat ccgggctcgt agatgctgga gtacgcagta cagggyyatg 781 gccsacmmtt mtcatcynct taagtttnta gattaaactt ttttgaaca Predicted gene structure (within BAC gi| 51315585 | segment 102776 to 104328): Exon 1 104328 104006 ( 323 n); EST 48 370 ( 323 n); score: 0.994 Intron 1 104005 103895 ( 111 n); Pd: 1.000 (s: 1.00), Pa: 0.817 (s: 1.00) Exon 2 103894 103823 ( 72 n); EST 371 442 ( 72 n); score: 1.000 Intron 2 103822 103165 ( 658 n); Pd: 0.998 (s: 1.00), Pa: 0.697 (s: 1.00) Exon 3 103164 102776 ( 389 n); EST 443 829 ( 387 n); score: 0.954 MATCH chr- 13149361- 0.974 784 0.946 C PGS_chr-_13149361- (104328 104006,103894 103823,103164 102776) Alignment: GTGGTTTCAG CGTTGCGTTC GACCCCCTCG ACGGCTCCAG CATTGTCGAC ACCAACTTCA 104269 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GTGGTTTCAG CGTTGCGTTC GACCCCCTCG ACGGCTCCAG CATTGTCGAC ACCAACTTCA 107 CCGTCGGAAC CATCTTCGGA GTCTGGCCCG GCGACAAGCT GACCGGAGTG ACCGGCGGCG 104209 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCGTCGGAAC CATCTTCGGA GTCTGGCCCG GCGACAAGCT GACCGGAGTG ACCGGCGGCG 167 ACCAGGTCGC TGCCGCGATG GGCATCTACG GCCCTCGCAC GACCTACATT GTCGCCCTCA 104149 |||||| || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACCAGGGTGC TGCCGCGATG GGCATCTACG GCCCTCGCAC GACCTACATT GTCGCCCTCA 227 AGGACTGCCC TGGGACGCAC GAGTTCCTCC TCCTCGACGA AGGTAAATGG CAGCATGTGA 104089 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACTGCCC TGGGACGCAC GAGTTCCTCC TCCTCGACGA AGGTAAATGG CAGCATGTGA 287 AGGACACCAC GACCATTGGG GAAGGGAAGA TGTTCTCTCC TGGTAATCTG AGGGCGACAT 104029 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| AGGACACCAC GACCATTGGG GAAGGGAAGA TGTTCTCTCC TGGTAATCTG AGGGCGACAT 347 TCGATAACCC TGAGTACGAC AAGGTACTCC GTTACTGGCT CCTGTTACTG TCAGTATTTT 103969 |||||||||| |||||||||| ||| TCGATAACCC TGAGTACGAC AAG....... .......... .......... .......... 370 TTTTTCTTCT TCTTAATATC TGCTACGGCT TTCTGTGCGC GCCTAATCGG TGCTACAAAT 103909 .......... .......... .......... .......... .......... .......... 370 ATATGTATCT TCAGCTCATC AACTACTACG TCAAGGAGAA GTACACATTG CGCTACACTG 103849 |||||| |||||||||| |||||||||| |||||||||| |||||||||| .......... ....CTCATC AACTACTACG TCAAGGAGAA GTACACATTG CGCTACACTG 416 GAGGAATGGT TCCCGATGTC AACCAGGTAC ATACGTATAT ATCACAAAAA CTTTAAATAA 103789 |||||||||| |||||||||| |||||| GAGGAATGGT TCCCGATGTC AACCAG.... .......... .......... .......... 442 TTCACACCCT TAGGGCTTGT TCGGTTAGCT CTCAATCCAT ATGGATTGAG TGGGATTGGG 103729 .......... .......... .......... .......... .......... .......... 442 TGGGATTAAA TCCCAAGCAA GTCAAAGTTC TTCTAAATTT TTTCCAATCC CATTCAATCC 103669 .......... .......... .......... .......... .......... .......... 442 ATGTATAATA GGAATAACCG AACAAACCCT TAGTAAACCA CACAGAAAAA TCCCGACACC 103609 .......... .......... .......... .......... .......... .......... 442 TCACAACCCG TACGTTCACT CGATCGGATC ACTAGCTTAA TTAGTAATCA GGAGTAGTAC 103549 .......... .......... .......... .......... .......... .......... 442 ATGTTCCAAA ACCAAACAGA TCCATATATG ATTAACCTGT CATGTCAACT CTCTACACAC 103489 .......... .......... .......... .......... .......... .......... 442 CTTGCACACC AAAACAGCCA AATTTTCAGA GAGGACGACG GCGCAAACTT TTGAGAAGAA 103429 .......... .......... .......... .......... .......... .......... 442 AGAATTTGGT TTGACGTTGC CAGTAAAATG TCTCGGGCTG TAGAGTCACT GCAAGCCCAT 103369 .......... .......... .......... .......... .......... .......... 442 GCTAGTGAAC ATTGAGCTCT GTGTACCAGC GTCTGCTTTA AAGCAAGGCC ACGCCAAGCA 103309 .......... .......... .......... .......... .......... .......... 442 ACACAGCAAT TCCCTACAGT GACCCCCCAA CCTCGCTTTC GCTTTAGGTC TTTTCCTATG 103249 .......... .......... .......... .......... .......... .......... 442 CCGCTTTCAG TACACAGAAC CTGCGTGAGC ACCAGCATAT ATGCATGCAT ATGATGCCTG 103189 .......... .......... .......... .......... .......... .......... 442 TGAGTATGGT CGATGATGAC GCAGATCATA GTGAAGGAGA AGGGCATCTT CACCAACGTG 103129 |||||| |||||||||| |||||||||| |||||||||| .......... .......... ....ATCATA GTGAAGGAGA AGGGCATCTT CACCAACGTG 478 ACGTCCCCGA CGGCCAAGGC CAAGCTGCGG CTCCTCTTCG AGGTGGCGCC CCTGGGCTTC 103069 |||||||||| |||||||||| |||||||||| || ||||||| |||||||||| |||||||||| ACGTCCCCGA CGGCCAAGGC CAAGCTGCGG CT-CTCTTCG AGGTGGCGCC CCTGGGCTTC 537 TTGATGGAGA AGGCCGGCGG GTACAGCAGC GACGGCAAGC AGTCGGTGCT GGACAGGGTG 103009 |||||||||| |||||||||| |||||||||| ||||||| || |||||||||| |||||||||| TTGATGGAGA AGGCCGGCGG GTACAGCAGC GACGGCAYGC AGTCGGTGCT GGACAGGGTG 597 ATCAACGAGC TCGACGAGCG GACCCAGGTG GCCTATGGGT CCAAGAACGA GATCATCCGG 102949 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| | |||||||| ATCAACGAGC TCGACGAGCG GACCCAGGTG GCCTATGGGT CCAAGAACGA GYTCATCCGG 657 TTCGAGGAGA CCCTCTACGG CTCGTCCAGG CTCGCCGCCA GCGCCACCGC CACCGCCCGC 102889 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||| | |||| TTCGAGGAGA CCCTCTACGG CTCGTCCAGG CTCGCCGCCA GCGCCACCGC CACSGSCCGC 717 GCCCTTATCT GAATTACTAG AATCCGGGCT CGTAGATGCT GGAGTACACA GTACAGGGAA 102829 |||||||| | |||||||||| |||||||||| |||||||||| ||||||| || |||||||| GCCCTTATST GAATTACTAG AATCCGGGCT CGTAGATGCT GGAGTACGCA GTACAGGGYY 777 ATTGCCCACT TTTTTCATCA ACTTAAGTTT TTAGATTAAA CTTTTTTGAA ACA 102776 || ||| || || ||||| ||||||||| ||||||||| |||||||| | ||| ATGGCCSACM MTTMTCATCY NCTTAAGTTT NTAGATTAAA CTTTTTTG-A ACA 829 hqPGS_chr-_13149361- (104328 104006,103894 103823,103164 102776)