Query EST sequence	XX (FILE: 38568889+])

         1  ACTTAGAAAA CCGCCAGGGA CCCCAGTGCA AAGTGGATTT CCNCTTAATC AATTCTGTTA
        61  TTCTTTTTAA AATGACCAGA GAACTTAGAA AATCCATAAC TTGATGAAAT CTTAATAAAA
       121  AGTTGTCAAA CCAATTTTGC TAGCTCTGGA ATATTGTAAT CTGTCATTTA AAAATAGTGA
       181  ACCCTATGCT TTCTGTTCTA AATTTTAGAG TTTAAAATTA AAAACAGAAA CCCCCTAAAC
       241  CTTGTTTAAT TAAGGAAAAT TAGTTTTTCT TTTGTGCTGA GCTTAAGAAA ATTTGTAGAT
       301  GTTTATACCT TATTTAGACA CTGTTTAAAA ATAGTAGAAA CACCAGCATT GGAAAATATG
       361  ATGTAGTTAT TCATTTAAAG CTATTTTCTC CAAAACTTAG AGAAAATCAG AAAGGCCTTA
       421  GAAATTAATG AACGGTGATT AATAATATTT TTCCTAGTTT ACTTATGTAA CAGAGAACCT
       481  AGGAAAAATA CAGAGACCAT TAATTTGGAC CAGTTTTAAA TTAAGATGAT TTGTTTAGCC
       541  TTATATAGAC TGAAAATCAA TTATTAGAAT TGCCAAACTA TAACC                

Predicted gene structure (within BAC gi| 51315585 | segment 73273 to 73861):

 Exon  1       73273       73861 ( 589 n);        EST           1         585 ( 585 n); score:  0.883

MATCH   chr+ 38568889+        0.883   589  1.007  C
PGS_chr+_38568889+     (73273  73861)

Alignment:

ACTTAAAAAA CCCGCCAGGG ACCCCAGTGC AAAGTGGTTT TCCATTTAAC CAATCCTGTT           73332
||||| |||| || ||||||| |||||||||| ||||||| || |||  ||||  |||| |||||
ACTTAGAAAA CC-GCCAGGG ACCCCAGTGC AAAGTGGATT TCCNCTTAAT CAATTCTGTT              59

AATCTTTTTT TTAAAATGAC AAGAGAACTT AGAAAACCTA TAACTTGATG AATTCTTCAT           73392
 |  || ||| ||||||||||  ||||||||| |||||| | | |||||||||| || |||| ||
-A--TTCTTT TTAAAATGAC CAGAGAACTT AGAAAATCCA TAACTTGATG AAATCTTAAT             116

AAAAAGATGT CAAACTAATT TTGCTAGCTC CTGAATATTA TGAACTATCA TTTAAAAATG           73452
|||||| ||| ||||| |||| ||||||||||   |||||||  | | || ||| ||||||||| 
AAAAAGTTGT CAAACCAATT TTGCTAGCTC TGGAATATTG TAATCTGTCA TTTAAAAATA             176

ATGAACCCTA TGCTTTCTGT TCTGAATTTT AGAGTTTAAA ATTAAAAACA GAAACTTACC           73512
 ||||||||| |||||||||| ||| |||||| |||||||||| |||||||||| |||||   | 
GTGAACCCTA TGCTTTCTGT TCTAAATTTT AGAGTTTAAA ATTAAAAACA GAAACCCCCT             236

AAACCTTGTT TAATTAAGGA AAATTAGTTT TTCTTCTGTA CTGAACCTAA GAAAATTTGT           73572
|||||||||| |||||||||| |||||||||| ||||| |||  |||| | ||| ||||||||||
AAACCTTGTT TAATTAAGGA AAATTAGTTT TTCTTTTGTG CTGAGCTTAA GAAAATTTGT             296

AGGTATTCAA ACCTCATTTA GACACTATTT AAAAATAGTA GGAACCCCAG CATTGAAAGA           73632
|| | || |  |||| ||||| |||||| ||| |||||||||| | ||| |||| ||||| || |
AGATGTTTAT ACCTTATTTA GACACTGTTT AAAAATAGTA GAAACACCAG CATTGGAAAA             356

TATGATGTAG ATATTCATTT AAAGCTATTT TGCCCAAAAC TTAGGAAAAA TCAGAAAGAC           73692
||||||||||  ||||||||| |||||||||| |  ||||||| ||||  |||| |||||||| |
TATGATGTAG TTATTCATTT AAAGCTATTT TCTCCAAAAC TTAGAGAAAA TCAGAAAGGC             416

ATTAGAAATT GATGAACAGT GATTAGAATT ATTTTTCCTA GTTTACTTAT GTAACAGAGA           73752
 |||||||||  |||||| || |||||  | | |||||||||| |||||||||| ||||||||||
CTTAGAAATT AATGAACGGT GATTAATAAT ATTTTTCCTA GTTTACTTAT GTAACAGAGA             476

ACCTAGGAAA AATACAGAGA CCATTAGTTT AGATCAGTTT TAAATTAAAA TGATTTATTT           73812
|||||||||| |||||||||| |||||| |||  || |||||| |||||||| | |||||| |||
ACCTAGGAAA AATACAGAGA CCATTAATTT GGACCAGTTT TAAATTAAGA TGATTTGTTT             536

AGCCTTATTT GAACTGAAAA TCAATTATTA GAGTTACACA ACTATAACC                       73861
|||||||| |   |||||||| |||||||||| || || |  | |||||||||            
AGCCTTATAT AGACTGAAAA TCAATTATTA GAATTGCCAA ACTATAACC                         585


hqPGS_chr+_38568889+     (73273  73861)