Query EST sequence	XX (FILE: 71306541+])

         1  CCAGAGTGTC GCTTCTGCAT CCATGGGCCC ACCGCCTCCA TGGCCGCTTC ATGCCTTCTC
        61  CTCATCTGTT CCGGTCTCCA GCCTGCCCCC CTCGTGCTCC AACGCCTCCA GGGCTTTCGG
       121  CCGCCGCAGG AGGCGAGGCT CAGGCGGCTG CGGTGGCGGA GTTCGTGACG TCGGAGAGGG
       181  TCAAGGTGGC GGCGATGCTG GGGCTAGCCC TCGCGCTCTG CAACGCCGAC CGCGTCGTCA
       241  TGTCCGTCGC CATCGTCCCT CTCTCGCAGG CGTACGGGTG GACCCCGTCA TTCGCCGGCG
       301  TCGTGCAGTC ATCCTTTCTT TGGGGATATC TGATGTCGCC GATAATTGGT GGAGCACTTG
       361  TTGATTACTA CGGTGGAAAA CGAGTCATGG CTTACGGTGT AGCATTATGG TCCTTGGCTA
       421  CGTTCCTGTC TCCATGGGCA GCTGGTCGAT CTATCTGGTT GTTTCTCTTT ACCAGAGTCC
       481  TGCTGGGTAT TGCAGAAGGA GTGGCACTCC CAAGCATGAA CAACATGGTG TTGAGGTGGT
       541  TTCCTCGCAC AGAGAGATCT AGTGCTGTGG GTATTGCAAT GGCTGGCTTT CAGCTTGGCA
       601  ATACCATTGG GTTACTTCTT TTCCCAATTA TCATGTCACG A                    

Predicted gene structure (within BAC gi| 51315585 | segment 158794 to 160086):

 Exon  1      158794      159101 ( 308 n);        EST           1         308 ( 308 n); score:  1.000
  Intron  1      159102      159618 ( 517 n); Pd:  0.206 (s:  1.00), Pa:  0.878 (s:  1.00)
 Exon  2      159619      159845 ( 227 n);        EST         309         535 ( 227 n); score:  1.000
  Intron  2      159846      159980 ( 135 n); Pd:  0.992 (s:  1.00), Pa:  0.994 (s:  1.00)
 Exon  3      159981      160086 ( 106 n);        EST         536         641 ( 106 n); score:  0.991

MATCH   chr+ 71306541+        0.998   641  1.000  C
PGS_chr+_71306541+     (158794  159101,159619  159845,159981  160086)

Alignment:

CCAGAGTGTC GCTTCTGCAT CCATGGGCCC ACCGCCTCCA TGGCCGCTTC ATGCCTTCTC          158853
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CCAGAGTGTC GCTTCTGCAT CCATGGGCCC ACCGCCTCCA TGGCCGCTTC ATGCCTTCTC              60

CTCATCTGTT CCGGTCTCCA GCCTGCCCCC CTCGTGCTCC AACGCCTCCA GGGCTTTCGG          158913
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CTCATCTGTT CCGGTCTCCA GCCTGCCCCC CTCGTGCTCC AACGCCTCCA GGGCTTTCGG             120

CCGCCGCAGG AGGCGAGGCT CAGGCGGCTG CGGTGGCGGA GTTCGTGACG TCGGAGAGGG          158973
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
CCGCCGCAGG AGGCGAGGCT CAGGCGGCTG CGGTGGCGGA GTTCGTGACG TCGGAGAGGG             180

TCAAGGTGGC GGCGATGCTG GGGCTAGCCC TCGCGCTCTG CAACGCCGAC CGCGTCGTCA          159033
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TCAAGGTGGC GGCGATGCTG GGGCTAGCCC TCGCGCTCTG CAACGCCGAC CGCGTCGTCA             240

TGTCCGTCGC CATCGTCCCT CTCTCGCAGG CGTACGGGTG GACCCCGTCA TTCGCCGGCG          159093
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
TGTCCGTCGC CATCGTCCCT CTCTCGCAGG CGTACGGGTG GACCCCGTCA TTCGCCGGCG             300

TCGTGCAGGT TCCCAGTTTT CTCTGACTCT GTGCGATTTT GTTTGGTTTC GCCTGAGCTA          159153
||||||||                                                         
TCGTGCAG.. .......... .......... .......... .......... ..........             308

GTGGCTACTG AGTAGTACTG ACTAGCCCAT TCTCATTCAA ACGTCTGGTT TTCAGAGTGC          159213
                                                                 
.......... .......... .......... .......... .......... ..........             308

TCAATTGCAG TAATTAGCGT TTTAATGATG TGGTGTTATA ATAATTTATT TAAATGATTA          159273
                                                                 
.......... .......... .......... .......... .......... ..........             308

CTTTTAAGTG AAACTGTCCT TACATGTCTT GAATTTCACA TGCGTGGGGT CTGGGGAAAA          159333
                                                                 
.......... .......... .......... .......... .......... ..........             308

TGTGGAGCTT CAAACCCGTG ACCTGACTAG TTGAGATAGC TCTCACTCTC ACCACTGCAT          159393
                                                                 
.......... .......... .......... .......... .......... ..........             308

CAGACGCATC AAACTTGCCC TTCTAGCAAA ATACTAAATA TAGTTAATGA GGTTTGAATT          159453
                                                                 
.......... .......... .......... .......... .......... ..........             308

TTCACTACAA AGCTGTGTAG CACTCATATT TCCTGCTTAT TTCTCACTCA GGCTGCTGTT          159513
                                                                 
.......... .......... .......... .......... .......... ..........             308

TTGAAGTAAA TGATGAAAAA TTACACATAA GAAAGTAAGG GCATGAGCTT GCCCATCTTA          159573
                                                                 
.......... .......... .......... .......... .......... ..........             308

TTTGATGAAT ATTCTGATGC CATTGTGTTT TGTCACTGCA AACAGTCATC CTTTCTTTGG          159633
                                                 ||||| ||||||||||
.......... .......... .......... .......... .....TCATC CTTTCTTTGG             323

GGATATCTGA TGTCGCCGAT AATTGGTGGA GCACTTGTTG ATTACTACGG TGGAAAACGA          159693
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GGATATCTGA TGTCGCCGAT AATTGGTGGA GCACTTGTTG ATTACTACGG TGGAAAACGA             383

GTCATGGCTT ACGGTGTAGC ATTATGGTCC TTGGCTACGT TCCTGTCTCC ATGGGCAGCT          159753
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GTCATGGCTT ACGGTGTAGC ATTATGGTCC TTGGCTACGT TCCTGTCTCC ATGGGCAGCT             443

GGTCGATCTA TCTGGTTGTT TCTCTTTACC AGAGTCCTGC TGGGTATTGC AGAAGGAGTG          159813
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
GGTCGATCTA TCTGGTTGTT TCTCTTTACC AGAGTCCTGC TGGGTATTGC AGAAGGAGTG             503

GCACTCCCAA GCATGAACAA CATGGTGTTG AGGTATCTAC CTTTGTAACA TCATTCCTTT          159873
|||||||||| |||||||||| |||||||||| ||                              
GCACTCCCAA GCATGAACAA CATGGTGTTG AG........ .......... ..........             535

TGACTACTCC ATCTCCAACT TTTTCCCCAC AAAAACATAT TGTTGTTTGG CTGTGGGAAT          159933
                                                                 
.......... .......... .......... .......... .......... ..........             535

TTCTGCTAAG ATTTATGTAA GTGTTTGCAT TGGCCCCTTT ATTACAGGTG GTTTCCTCGC          159993
                                                   ||| ||||||||||
.......... .......... .......... .......... .......GTG GTTTCCTCGC             548

ACAGAGAGAT CTAGTGCTGT GGGTATTGCA ATGGCTGGCT TTCAGCTTGG CAATACCATT          160053
|||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
ACAGAGAGAT CTAGTGCTGT GGGTATTGCA ATGGCTGGCT TTCAGCTTGG CAATACCATT             608

GGGTTACTTC TTTCCCCAAT TATCATGTCA CGA                                       160086
|||||||||| ||| |||||| |||||||||| |||                             
GGGTTACTTC TTTTCCCAAT TATCATGTCA CGA                                          641


hqPGS_chr+_71306541+     (158794  159101,159619  159845,159981  160086)