Query EST sequence	XX (FILE: 18963634+])

         1  CGTTGCTGTC GGAGGATCTA TGGATATCTG CTTTCCTGTT GGTACTAAGG AAGCCAACAG
        61  GAAATTTTGG ACTGCTACCT GGATTAATGC TCGAGAAAAA AGGTGCATGA CATCAAAAAT
       121  TGCTATTCTT ATTTGTTCTA TAGAACCTTA TGTGGAAACG TGCATTACAC AGTCCCAGCC
       181  TCCTAGAGAC TATAGACATG GTATGCAGTC CCTAGGGACC GAGCCTCAGA GCTAGAGGAA
       241  GTTATTCGTG TACATGGATA TGGAGGAAAC CCTGACCGCC TTGCATCGCT GGCAGTGCTT
       301  GGGGAGAAGA CAACATTGAT GTCTCCAGAT GTTCTTGTAG CCCGTGGTGT GCCCTGCTGT
       361  AGGTTAGTAC AGTATCCTGG                                            

Predicted gene structure (within BAC gi| 51315585 | segment 5087 to 5892):

 Exon  1        5087        5124 (  38 n);        EST          12          49 (  38 n); score:  1.000
  Intron  1        5125        5208 (  84 n); Pd:  0.859 (s:  0.00), Pa:  0.648 (s:  0.94)
 Exon  2        5209        5352 ( 144 n);        EST          50         195 ( 146 n); score:  0.938
  Intron  2        5353        5520 ( 168 n); Pd:  0.439 (s:  1.00), Pa:  0.000 (s:  0.96)
 Exon  3        5521        5608 (  88 n);        EST         196         283 (  88 n); score:  0.966
  Intron  3        5609        5694 (  86 n); Pd:  0.600 (s:  0.98), Pa:  0.943 (s:  1.00)
 Exon  4        5695        5772 (  78 n);        EST         284         362 (  79 n); score:  0.955
  Intron  4        5773        5874 ( 102 n); Pd:  0.000 (s:  0.93), Pa:  0.988 (s:  0.00)
 Exon  5        5875        5892 (  18 n);        EST         363         380 (  18 n); score:  1.000

MATCH   chr+ 18963634+        0.950   366  0.963  C
PGS_chr+_18963634+     (5087  5124,5209  5352,5521  5608,5695  5772,5875  5892)

Alignment:

GAGGATCTAT GGATATCTGC TTTCCTGTTG GTACTAAGGT TTGCTCCCAT CCCTGCCTTC            5146
|||||||||| |||||||||| |||||||||| ||||||||                        
GAGGATCTAT GGATATCTGC TTTCCTGTTG GTACTAAG.. .......... ..........              49

TTTTATACCA TGTTTGCAAA GAATTACCAT TTTACCTGCT ATTTTTGTTT GCTATTCTTA            5206
                                                                 
.......... .......... .......... .......... .......... ..........              49

AGGAAGCAAA CAGGAAATTT TGGACTGGTA CCTGGATTAA TGCTTGAGAA AAAAGGTGCA            5266
  ||||| || |||||||||| ||||||| || |||||||||| |||| ||||| ||||||||||
..GAAGCCAA CAGGAAATTT TGGACTGCTA CCTGGATTAA TGCTCGAGAA AAAAGGTGCA             107

TGACATC-AA TATTGCTATT C-TATTTGTT CTATAGAACC TTATGTGGAA ACGTGCATTA            5324
||||||| ||  ||||||||| | |||||||| |||||||||| |||||||||| ||||||||||
TGACATCAAA AATTGCTATT CTTATTTGTT CTATAGAACC TTATGTGGAA ACGTGCATTA             167

CACAGTCCCA GCCTCCTAGA GACTATAGGT ATGCTGTTAT ATATGTTTGA AGAAAACAGA            5384
|||||||||| |||||||||| ||||||||                                   
CACAGTCCCA GCCTCCTAGA GACTATAG.. .......... .......... ..........             195

GAAAATGAAA ATTGTGTGCT TAGTAATTGT ATGCGCTGCT TTACTTTTGT CATGTATTGA            5444
                                                                 
.......... .......... .......... .......... .......... ..........             195

TTGAAAGTTT AAATATGCCA GCTTTTCATT CACTACACTA AACCAGTTAA CTTCCTTTCA            5504
                                                                 
.......... .......... .......... .......... .......... ..........             195

CACCGGTGCA CCCAAGACAT GGTATGCAGT GCCTAGGGGC CGAGCCTCAG AGCTAGAGGA            5564
                 |||| ||||||||||  ||||||| | |||||||||| ||||||||||
.......... ......ACAT GGTATGCAGT CCCTAGGGAC CGAGCCTCAG AGCTAGAGGA             239

AGTTATTCGT GTACATGGAT ATGGAGTAAA CCCTGACCGC CTTGGTATTT GTCCTTTCTC            5624
|||||||||| |||||||||| |||||| ||| |||||||||| ||||                 
AGTTATTCGT GTACATGGAT ATGGAGGAAA CCCTGACCGC CTTG...... ..........             283

ATGCTCGCCA TCTGCATGTT TCGGTTGTGG TCTAGCAGGT TCCATAAATT TGTATTGTTA            5684
                                                                 
.......... .......... .......... .......... .......... ..........             283

ATCCACGCAG CATCGCTGGC AGTGCTTGGG GAGAAGACAA CATTGATGTC TCCAGATGTT            5744
           |||||||||| |||||||||| |||||||||| |||||||||| ||||||||||
.......... CATCGCTGGC AGTGCTTGGG GAGAAGACAA CATTGATGTC TCCAGATGTT             333

CTTGTAG-CC GTGGTGTGCC CTACTGTAGG TACAAGCTCT GAAATGGCTA GAGTTTCCAT            5803
||||||| || |||||||||| || ||||||                                  
CTTGTAGCCC GTGGTGTGCC CTGCTGTAG. .......... .......... ..........             362

TGGGTCAAAT GTTCATGATA TTTTCAGACA TCAGATCTTA TGATTTTTTT TGCTGATATG            5863
                                                                 
.......... .......... .......... .......... .......... ..........             362

TACTGTTTCA GGTTAGTACA GTATCCTGG                                              5892
            ||||||||| |||||||||                                  
.......... .GTTAGTACA GTATCCTGG                                               380


hqPGS_chr+_18963634+     (5087  5124,5209  5352,5521  5608,5695  5772,5875  5892)