Query EST sequence XX (FILE: 78119605-]) 1 gtcctacatg gaaatgtcaa aatacagctg ggacatttgg tgccattttt gggaactatt 61 ggagcagggt tttttgttga taggaagggg ttctttccgg ggatttttga tattgacgtc 121 gcttttatac ttcagcagtg ctcttttttg gggacatctt tgctactgga gagcgtgttg 181 attttgatgg cactggctag caactcagag gaactctgcg gttttctgtc cttaaaacac 241 ataatgttga ttcaggacag tgtttttacc cccaaccatc aagaagttat ttgcacctga 301 agataaacaa cttcagttac gactgtacag tattgggttc aactttttaa agcacgcagt 361 gagtttattt tggatgtgga gtatcagtga tagataaaca cacgctgtga gtttatcttg 421 gaagttgaat atcagtgatg gataaacaca tggaactgtc tttatagatc gttttagatt 481 ttcttggagg gatagtccct gacgatgtaa catggaataa acaacgggca ggatgccaac 541 cattaatggc gccgaaagta gtacataact gaaactgatt tgcagggtag ttaggaaatt 601 ggaatcccaa ccattaaggg agtatgggtt tg Predicted gene structure (within BAC gi| 51315585 | segment 161258 to 161975): Exon 1 161258 161267 ( 10 n); EST 1 10 ( 10 n); score: 1.000 Intron 1 161268 161358 ( 91 n); Pd: 0.412 (s: 0.00), Pa: 0.955 (s: 0.78) Exon 2 161359 161975 ( 617 n); EST 11 632 ( 622 n); score: 0.964 MATCH chr+ 78119605- 0.964 627 0.992 C PGS_chr+_78119605- (161258 161267,161359 161975) Alignment: GTCCTACATG GTACTAACTA GTAAATATGC TCCTTGTGTT AGCTAATATA TTTCCATTTT 161317 |||||||||| GTCCTACATG .......... .......... .......... .......... .......... 10 GTTGCATTAA CTAACTTTGA TCTACAATTG TGCTGTGACA GG-AATGTC- AAATACAGCT 161375 | |||||| |||||||||| .......... .......... .......... .......... .GAAATGTCA AAATACAGCT 29 GGGACATTTG CTGCCA-TTC TAGGAACTAT TGGAGCAGGG TTTTTTGTTG ATAGG-ATGG 161433 |||||||||| ||||| || | |||||||| |||||||||| |||||||||| ||||| | || GGGACATTTG GTGCCATTTT TGGGAACTAT TGGAGCAGGG TTTTTTGTTG ATAGGAAGGG 89 GTTCTTTCCG TGGATTTTTG ATATTGACGT CGCTCTTATA CTTCAGCAGT GCTCTTTTCT 161493 |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||| |||||||| | GTTCTTTCCG GGGATTTTTG ATATTGACGT CGCTTTTATA CTTCAGCAGT GCTCTTTTTT 149 -GGGACATCT TTGCTACTGG AGAGCGTGTT GATTTTGATG GCACTGGCTA GCAACTCAGA 161552 ||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGGGACATCT TTGCTACTGG AGAGCGTGTT GATTTTGATG GCACTGGCTA GCAACTCAGA 209 GGAACTCTGC GGTTTTCTGT CCTTAAAACA CATAATGTTG ATTCAGGACA GTGTTTTTAC 161612 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| GGAACTCTGC GGTTTTCTGT CCTTAAAACA CATAATGTTG ATTCAGGACA GTGTTTTTAC 269 CGCCAACCAT CAAGAAGTTA TTTGCACCTG AAGATAAACA ACTTCAGTTA CGACTGTACA 161672 | |||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| CCCCAACCAT CAAGAAGTTA TTTGCACCTG AAGATAAACA ACTTCAGTTA CGACTGTACA 329 GTATTGGGTT CAACTTTTTA AAGCACGCAG TGAGTTTATC TTGGATGTCG AGTATCAGTG 161732 |||||||||| |||||||||| |||||||||| ||||||||| |||||||| | |||||||||| GTATTGGGTT CAACTTTTTA AAGCACGCAG TGAGTTTATT TTGGATGTGG AGTATCAGTG 389 ATAGATAAAC ACACGCTGTG AGTTTATCTT GGAAGTTGAA TATCAGTGAT GGATAAACAC 161792 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATAGATAAAC ACACGCTGTG AGTTTATCTT GGAAGTTGAA TATCAGTGAT GGATAAACAC 449 ATGGAACTGT CTTTATAGAT CGTTTTAGAT TTTCTTGGAG GGATAGTCCC TGACGATGTA 161852 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ATGGAACTGT CTTTATAGAT CGTTTTAGAT TTTCTTGGAG GGATAGTCCC TGACGATGTA 509 ACATGGAATA AACAACGGGC AGGATGCCAA CCATTAATGG CGCCGAAAGT AGTACATAAC 161912 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| ACATGGAATA AACAACGGGC AGGATGCCAA CCATTAATGG CGCCGAAAGT AGTACATAAC 569 TGAAACTGAT TTGCAGGGTA GTTAGGAAAT TGGAATCCCA ACCATTAAGG GAGTATGGGT 161972 |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| |||||||||| TGAAACTGAT TTGCAGGGTA GTTAGGAAAT TGGAATCCCA ACCATTAAGG GAGTATGGGT 629 TTG 161975 ||| TTG 632 hqPGS_chr+_78119605- (161359 161975)