# Project makefile

# Michael E Sparks (mespar1@iastate.edu)
# Last modified : 8 August 2004

# Copyright (c) 2004 Michael E Sparks
# All rights reserved.

# Permission to use, copy, modify, and distribute this software for any
# purpose with or without fee is hereby granted, provided that the above
# copyright notice and this permission notice appear in all copies.
#
# THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
# WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
# ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
# WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
# ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
# OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.

CC=gcc
CFLAGS=-ansi -pedantic-errors -Wall -Werror -O2 -I./

BSSM_build_objs = sequence_parse.o bssm_utils.o BSSM_build.o
BSSM_print_objs = BSSM_print.o bssm_utils.o

ALL : indexFasSeq BSSM_build BSSM_print
	rm -f *.o

indexFasSeq : indexFasSeq.c
	$(CC) $(CFLAGS) -o ../bin/indexFasSeq indexFasSeq.c
BSSM_build : $(BSSM_build_objs)
	$(CC) -o ../bin/BSSM_build $(BSSM_build_objs)
BSSM_print : ${BSSM_print_objs}
	${CC} -o ../bin/BSSM_print ${BSSM_print_objs}

sequence_parse.o : sequence_parse.c
	$(CC) $(CFLAGS) -c sequence_parse.c -o $@
bssm_utils.o : bssm_utils.c
	$(CC) $(CFLAGS) -c bssm_utils.c -o $@
BSSM_build.o : BSSM_build.c
	$(CC) $(CFLAGS) -c BSSM_build.c -o $@
BSSM_print.o : BSSM_print.c
	${CC} ${CFLAGS} -c BSSM_print.c -o $@
