Bioinformatics2go

What's New

Group:

V. Brendel serving as Chair of the iPlant Collaborative Scientific Advisory Board

V. Brendel appointed Consulting Editor of The Plant Cell

Recent publications:

Duvick, J., Standage, D.S., Merchant, N. & Brendel, V.P. (2016) xGDBvm: A Web GUI-driven workflow for annotating eukaryotic genomes in the cloud. The Plant Cell [Advance Publication: 28 March 2016]

Standage, D.S., Berens, A.J., Glastad, K.M., Severin, A.J., Brendel, V.P. & Toth, A.L. (2016) Genome, transcriptom and methylome sequencing of a primitively eusocial wasp reveal a greatly reduced DNA methylaiton system in a social insect. Molecular Ecology [First published: 15 March 2016]

PlantGDB News:

xGDBvm on YouTube

Bioinformatics2go

Tracembler



Description: A contig assembly tool.

Citation: Dong, Q., Wilkerson, M.D. & Brendel, V. (2007) Tracembler - software for in silico chromosome walking in unassembled genomes. BMC Bioinformatics 8, 151. [PubMed ID: 17490482] [online abstract] [PDF]

Web Implementations: Tracembler

Download: Download Tracembler